A subscription to JoVE is required to view this content. Sign in or start your free trial.
8,031 Views
•
06:34 min
•
January 21, 2020
DOI:
1Beijing Key Laboratory of Agricultural Genetic Resources and Biotechnology, Beijing Agro-Biotechnology Research Center,Beijing Academy of Agriculture and Forestry Sciences, 2State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, School of Advanced Agricultural Sciences and School of Life Sciences,Peking University
Summary
Automatically generated
קו ביואינפורמטיקה, כלומר miRDeep-P2 (miRDP2 בקיצור), עם קריטריונים מעודכנים של הצמח Mirdeep ואלגוריתם מקוצר, יכול לנתח באופן מדויק וביעילות מיקרוסקריפט בצמחים, במיוחד עבור מינים עם genomes מורכבים וגדולים.
Explore More Videos
Bioinformatics PipelineMicroRNA TranscriptomesPlantsMiRDeep2Plant MicroRNAsTranscriptional RegulatorsPlant DevelopmentEnvironmental ChallengesFalse PositivesProcessing TimeHigh Confidence MicroRNA AnnotationGenome FunctionMiRDeep2 PipelineArabidopsis ThalianaGenome Reference IndexNoncoding RNA Reference IndexDeep Sequencing ReadsAdaptersFASTA Identifiers
Read Article
Cite this Article
Wang, Y., Kuang, Z., Li, L., Yang, X. A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants. J. Vis. Exp. (155), e59864, doi:10.3791/59864 (2020).
Copy