The entire 3D structure and cellular content of organoids, as well as their phenotypic resemblance to the original tissue can be captured using the single-cell resolution 3D imaging protocol described here. This protocol can be applied to a wide range of organoids varying in origin, size and shape.
van Ineveld, R. L., Ariese, H. C., Wehrens, E. J., Dekkers, J. F., Rios, A. C. Single-Cell Resolution Three-Dimensional Imaging of Intact Organoids. J. Vis. Exp. (160), e60709, doi:10.3791/60709 (2020).