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Pooled shRNA Screen for Reactivation of MeCP2 on the Inactive X Chromosome
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11:15 min
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March 02, 2018
DOI:
1Clinical Research Division,Fred Hutchinson Cancer Research Center, 2Hematology Branch, National Heart, Lung and Blood Institute,National Institutes of Health, 3Epigenetics Program, Department of Cell and Developmental Biology,University of Pennsylvania Perelman School of Medicine, 4Departments of Medicine and Biochemistry,University of Washington
Summary
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We report a small hairpin RNA (shRNA) and next generation sequencing-based protocol for identifying regulators of X-chromosome inactivation in a murine cell line with firefly luciferase and hygromycin resistance genes fused to the methyl CpG binding protein 2 (MeCP2) gene on the inactive X chromosome.
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Leko, V., Sripathy, S., Adrianse, R. L., Loe, T., Park, A., Lao, U., Foss, E. J., Bartolomei, M. S., Bedalov, A. Pooled shRNA Screen for Reactivation of MeCP2 on the Inactive X Chromosome. J. Vis. Exp. (133), e56398, doi:10.3791/56398 (2018).
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