Summary

MultiBac System-Based Purification and Biophysical Characterization of Human Myosin-7a

Published: August 23, 2024
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Summary

This protocol details the procedures for recombinantly producing the human myosin-7a holoenzyme using the MultiBac Baculovirus system and for studying its motility using a tailored in vitro filament gliding assay.

Abstract

Myosin-7a is an actin-based motor protein vital for auditory and visual processes. Mutations in myosin-7a lead to Usher syndrome type 1, the most common and severe form of deaf-blindness in humans. It is hypothesized that myosin-7a forms a transmembrane adhesion complex with other Usher proteins, essential for the structural-functional integrity of photoreceptor and cochlear hair cells. However, due to the challenges in obtaining pure, intact protein, the exact functional mechanisms of human myosin-7a remain elusive, with limited structural and biomechanical studies available. Recent studies have shown that mammalian myosin-7a is a multimeric motor complex consisting of a heavy chain and three types of light chains: regulatory light chain (RLC), calmodulin, and calmodulin-like protein 4 (CALML4). Unlike calmodulin, CALML4 does not bind to calcium ions. Both the calcium-sensitive, and insensitive calmodulins are critical for mammalian myosin-7a for proper fine-tuning of its mechanical properties. Here, we describe a detailed method to produce recombinant human myosin-7a holoenzyme using the MultiBac Baculovirus protein expression system. This yields milligram quantities of high-purity full-length protein, allowing for its biochemical and biophysical characterization. We further present a protocol for assessing its mechanical and motile properties using tailored in vitro motility assays and fluorescence microscopy. The availability of the intact human myosin-7a protein, along with the detailed functional characterization protocol described here, paves the way for further investigations into the molecular aspects of myosin-7a in vision and hearing.

Introduction

Myosins are molecular motor proteins that interact with actin to drive numerous cellular processes1,2,3,4. Humans possess 12 classes and 39 myosin genes5, which are involved in a wide range of physiological functions, such as muscle contraction6 and sensory processes7. Each myosin molecule is a multimeric complex composed of a heavy chain and light chains. The heavy chain is divided into head, neck, and tail regions. The head contains actin- and nucleotide-binding sites that are responsible for ATP hydrolysis and generating force on actin filaments2. The neck is formed by several α-helical IQ motifs where a specific set of light chains are bound. They together function as a lever arm to amplify the motor's conformational changes into large movements8,9,10. The tail contains class-specific subdomains and plays a regulatory role in tuning myosin's motor activity and mediating interactions with cellular binding partners2,11.

Human myosin-7a, a member of class-7 myosins, is essential for auditory and visual processes12,13. The IQ motifs of human myosin-7a are associated with a unique combination of light chains, including the regulatory light chain (RLC), calmodulin, and calmodulin-like protein 4 (CALML4)14,15,16. Besides stabilizing the lever arm, these light chains regulate the mechanical properties of myosin-7a in response to calcium signaling, a feature that appears to be unique to the mammalian isoform14.

Defects in the gene encoding the myosin-7a heavy chain (MYO7A/USH1B) are responsible for Usher syndrome type 1, the most severe form of combined vision and hearing loss in humans17. Additionally, the light chain gene CALML4, is among the candidate genes mapped to contain the causative allele for USH1H, another variant of type 1 Usher syndrome15,18. In the retina, myosin-7a is expressed in the retinal pigment epithelium and photoreceptor cells13. It has been implicated in the localization of melanosomes in the retinal pigment epithelium (RPE)19 and phagocytosis of photoreceptor outer segment disks by the RPE cells20. In the inner ear, myosin-7a is primarily found in the stereocilia, where it plays a critical role in establishing hair bundles and in gating the mechano-electrical transduction process12,21,22.

While the importance of myosin-7a in sensory cells is well established, its functional mechanisms at the molecular level remain poorly understood. This gap in knowledge is partly due to the challenges in purifying the intact protein, especially the mammalian isoform. Recently, significant progress has been made using the MultiBac system to recombinantly express the complete human myosin-7a holoenzyme14. This advancement has enabled structural and biophysical characterizations of this motor protein, leading to the discovery of several unique properties of human myosin-7a that are specifically adapted for mammalian auditory functions14,23.

The MultiBac system is an advanced baculovirus/insect cell platform specifically designed for the expression of eukaryotic multimeric complexes24,25. A key feature of this system is its ability to host multiple gene expression cassettes, each encoding a subunit of the complex, within a single MultiBac baculovirus. The assembly of the multigene expression cassettes is facilitated through a so-called multiplication module: a homing endonuclease (HE) site and a matching designed BstXI site flanking the multiple cloning sites (MCS). This module enables the iterative assembly of a single expression cassette by restriction/ligation, leveraging the fact that the HE and BstXI restriction sites are eliminated upon their ligation. In this paper, human myosin-7a heavy chain, RLC, calmodulin, and CALML4 are each cloned into the multiplication module within the pACEBac1 vector (Figure 1A), which are then assembled into a multigene expression cassette through the iterative process (Figure 1B). The myosin-7a multigene cassette is integrated into the baculoviral genome (bacmid) through the transposition of the mini-Tn7 element from the pACEBac1 vector to the mini-attTn7 target site in the genome (Figure 1C). Following procedures for bacmid purification, baculovirus production, and amplification (Figure 1D,E), the recombinant myosin-7a MultiBac baculovirus is prepared and can be used for large-scale protein production (Figure 1F). Additionally, the myosin-7a light chains can be produced separately in E. coli and purified using a cleavable His6-SUMO tag26,27,28. The purified light chains are useful for studying their binding dynamics and regulation of myosin-7a.

The purified myosin-7a protein can be subjected to structural, biochemical, and biophysical studies to gain insights into the structural-functional regulation of this motor protein. Additionally, its interactions with the actin network and other binding proteins29 can be examined using a variety of in vitro reconstitution approaches. Findings from these analyses will inform the biophysical properties of this myosin, leading to a mechanistic understanding of how myosin-7a drives the cytoskeletal changes and ultimately shapes the unique morphology and function of sensory cells. In this paper, we detail a workflow for actin filament gliding assay that has been specifically adapted for mammalian myosin-7a. Actin filament gliding assay is a robust in vitro motility assay that quantitatively studies the movement of fluorescent actin filaments propelled by a large number of myosin motors immobilized on a coverslip surface30,31,32. The advantages of this assay include its simplicity of setup, minimal equipment requirements (a wide-field fluorescence microscope equipped with a digital camera), and high reproducibility. Additionally, because the motion of actin filaments is driven by a cluster of immobilized myosin motors, this assay is particularly useful for studying the motility of monomeric myosins such as myosin-7a14,33. The protocols include several modifications, from experimental procedures to imaging analysis, specifically tailored to the unique motile properties of mammalian myosin-7a. With the availability of intact myosin-7a protein and the functional characterization protocol outlined here, this paper lays the groundwork for further investigation into the molecular roles of myosin-7a in both physiological and pathological processes.

Protocol

NOTE: Here we describe a protocol for synthesizing the intact human myosin-7a holoenzyme and characterizing its motility in vitro. This protocol is divided into three sections: first, expressing the human myosin-7a using the MultiBac baculovirus protein expression system; Second, purifying myosin-7a light chains separately using the E.coli His6-SUMO system; and lastly, studying the motility of human myosin-7a using the actin-filament gliding assay. 1. MultiBac system-based myosi…

Representative Results

The purified myosin-7a complex and light chain proteins can be evaluated by SDS-PAGE gel electrophoresis, as shown in Figure 3. The band above the 200 kDa marker corresponds to the myosin-7a heavy chain (255 kDa). The three bands migrating between the 22 and 14 kDa markers from top to bottom are RLC (20 kDa), calmodulin, and CALML4, respectively. While calmodulin and CALML4 have a similar molecular weight of approximately 17 kDa, the two proteins can be separated using a 16% Tris-Glycine gel…

Discussion

Presented here is a detailed protocol for the production of recombinant human myosin-7a protein from insect cells. Although the Sf9/baculovirus system has been used to produce a variety of myosins40,41,42,43, only recently has the mammalian myosin-7a been successfully purified using the MultiBac baculovirus system14. Mammalian myosin-7a is found to associate with three t…

Divulgaciones

The authors have nothing to disclose.

Acknowledgements

We thank the Microscopy Imaging Facility and Visual Function and Morphology Core at West Virginia University for discussion and help with image analysis. This work is supported by the tenure-track startup funds from West Virginia University School of Medicine to R.L. This work is also supported by National Institute of General Medical Sciences (NIGMS) Visual Sciences Center of Biomedical Research Excellence (Vs-CoBRE) (P20GM144230), and the NIGMS West Virginia Network of Biomedical Research Excellence (WV-INBRE) (P20GM103434).

Materials

1.7 mL microcentrifuge tubes VWR 87003-294
1X FLAG Peptide GenScript N/A Custom peptide synthesis
22x22mm No. 1.5 coverslips VWR 48366-227
250 mL Conical Centrifuge Tubes Nunc 376814
250 mL Vented Erlenmyer Shaker Flask IntelixBio DBJ-SF250VP
2-Mercaptoethanol VWR M131
75x25x1 mm Vistavision microscope slides VWR 16004-42
Actin Protein (>99% Pure) Cytoskeleton AKL99
Amicon Ultra-0.5 Centrifugal Filter Unit Millipore Sigma UFC510024
Amicon Ultra-4 Centrifugal Filter Unit Millipore Sigma UFC801024
ANTI-FLAG M2 Affinity Gel Millipore Sigma A2220
ATP Millipore Sigma A7699
ATP Millipore Sigma A7699
Bio-Spin Disposable Chromatography Column Bio-Rad 732-6008
BL21 Competent E. coli New England Biolabs C2530H
Bluo-Gal Thermo Fisher 15519028
Bovine Serum Albumin Millipore Sigma 5470
BstXI Enzyme New England Biolabs R0113S
Calmodulin Millipore Sigma 208694
Catalase Millipore Sigma C40
Champion pET-SUMO Expression System Thermo Fisher K30001
cOmplete, EDTA-free Protease Inhibitor Cocktail Roche Diagnostics 5056489001
Cutsmart Buffer New England Biolabs B6004S
DL-Dithiothreitol Millipore Sigma DO632
DL-Dithiothreitol Millipore Sigma DO632
DNase I, Spectrum Chemical Fisher Scientific 18-610-304
Double-Sided Tape Office Depot 909955
EGTA, Molecular Biology Grade Millipore Sigma 324626-25GM
EGTA, Molecular Biology Grade Millipore Sigma 324626-25GM
Ethanol Thermo Fisher BP2818
ExpiFectamine Sf Transfection Reagent Gibco A38915
FAST program http://spudlab.stanford.edu/fast-for-automatic-motility-measurements; 
Fisherbrand Model 505 Sonic Dismembrator Fisher Scientific FB505110
Gentamicin Reagent Solution Gibco 15710-064 10 mg/mL in distilled water
Glucose Millipore Sigma G5767
Glucose Oxidase Millipore Sigma G2133
Glycerol Invitrogen 15514-011
HisPur Cobalt Resin Thermo Fisher 89966
I-CeuI Enzyme New England Biolabs R0699S
Image Stabilizer Plugin https://www.cs.cmu.edu/~kangli/code/Image_Stabilizer.html
ImageJ FIJI https://imagej.net/Fiji/Downloads
Imidazole Millipore Sigma I2399
In-Fusion Snap Assembly Master Mix TaKaRa 638948
IPTG Thermo Fisher 15529019
Isopropanol Fisher Scientific A451SK
Kanamycin Fisher Scientific AAJ67354AD
Large Orifice Pipet Tips Fisher Scientific 02-707-134 1-200uL
LB Agar, Ready-Made Powder Thermo Fisher J75851-A1
Leupeptin Protease Inhibitor Thermo Fisher 78435
Magnesium chloride Thermo Fisher J61014.=E 1M
Magnesium chloride Thermo Fisher J61014.=E 1M
Max Efficiency DH10Bac Competent Cells Gibco 10361012
Microcentrifuge Tubes, 1.7mL VWR 87003-294
Microcentrifuge Tubes, 1.7mL VWR 87003-294
Microcentrifuge Tubes, 1.7mL VWR 87003-294
Microscope Nikon Model: Eclipse Ti with H-TIRF system with 100X TIRF objective
Microscope Camera ORCA-Fusion BT
Microscope Laser Unit Andor iXon Ultra
Miller's LB Broth Corning 46-050-CM
MOPS Millipore Sigma M3183
MOPS Millipore Sigma M3183
NanoDrop One/OneC Microvolume UV-Vis Spectrophotometer Thermo Fisher ND-ONE-W
NanoDrop One/OneC Microvolume UV-Vis Spectrophotometer Thermo Fisher ND-ONE-W
NEB 5-alpha Competent E.coli (High Efficiency) New England Biolabs C2987H
NEBuffer r3.1 New England Biolabs B6003S
NIS Elements Nikon
NIS-Elements Nikon
Nitrocellulose LADD Research Industries 53152
Opti-MEM I Reduced Serum Medium Gibco 31985070
pACEBac1 Vector Geneva Biotech
Parafilm Millipore Sigma P7793
PMSF Millipore Sigma 78830
PureLink RNase A (20 mg/mL) Invitrogen 12091021
QIAprep Spin Miniprep Kit (250) QIAGEN 27106
QIAquick Gel Extraction Kit (50) QIAGEN 28704
QIAquick PCR Purification Kit (50) QIAGEN 28104
Quick CIP New England Biolabs M0525S
Rhodamine phalloidin Invitrogen R415
S.O.C. Medium Invitrogen 15544034
SENP2 protease PMID:17591783 Purified in the lab
Sf9 cells Thermo Fisher 11496015
Sf-900 III SFM (1X) – Serum Free Media Complete Gibco 12658-027
Slide-A-Lyzer G3 Dialysis Cassettes, 10K MWCO, 3 mL Thermo Fisher A52971
Sodium chloride Millipore Sigma S7653
Sodium chloride Millipore Sigma S7653
Stericup Quick Release Vacuum Driven Disposable Filtration System Millipore Sigma S2GPU01RE
Superdex 75 Increase 10/300 GL Cytiva 29148721
T4 DNA Ligase New England Biolabs M0202S
T4 DNA Ligase Buffer – 10X with 10mM ATP New England Biolabs B0202A
Tetracycline Hydrochloride Millipore Sigma T7660-5G
Tris Millipore Sigma 10708976001
Triton X American Bioanalytical 9002-93-1

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Wright, M., Redford, S., Vehar, J., Courtney, K. C., Billington, N., Liu, R. MultiBac System-based Purification and Biophysical Characterization of Human Myosin-7a. J. Vis. Exp. (210), e67135, doi:10.3791/67135 (2024).

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