This protocol presents how to quantify AAV transduction efficiency in mouse retina using digital droplet PCR (dd-PCR) together with small scale AAV production, intravitreal injection, retinal imaging, and retinal genomic DNA isolation.
Okan, I. C. T., Ahmadian, M., Tutuncu, Y., Altay, H. Y., Agca, C. Digital Droplet PCR Method for the Quantification of AAV Transduction Efficiency in Murine Retina. J. Vis. Exp. (178), e63038, doi:10.3791/63038 (2021).