É necessária uma assinatura da JoVE para visualizar este conteúdo. Faça login ou comece sua avaliação gratuita.
Assisted Selection of Biomarkers by Linear Discriminant Analysis Effect Size (LEfSe) in Microbiome Data
14,231 Views
•
04:57 min
•
May 16, 2022
DOI:
1Marine Resources Research Centre,Tianjin Research Institute for Water Transport Engineering, M.O.T., 2Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering,North China Electric Power University, 3School of Environmental Science and Engineering,Huazhong University of Science and Technology
Summary
Automatically generated
LEfSe (LDA Effect Size) is a tool for high-dimensional biomarker mining to identify genomic features (such as genes, pathways, and taxonomies) that significantly characterize two or more groups in microbiome data.
Read Article
Cite this Article
Chang, F., He, S., Dang, C. Assisted Selection of Biomarkers by Linear Discriminant Analysis Effect Size (LEfSe) in Microbiome Data. J. Vis. Exp. (183), e61715, doi:10.3791/61715 (2022).
Copy