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JoVE Journal
Biology

This Conteúdo is Open Access.

Workflow for High-content, Individual Cell Quantification of Fluorescent Markers from Universal Microscope Data, Supported by Open Source Software
 

Workflow for High-content, Individual Cell Quantification of Fluorescent Markers from Universal Microscope Data, Supported by Open Source Software

Article DOI: 10.3791/51882-v 09:57 min December 16th, 2014
December 16th, 2014

Capítulos

Resumo

Presented is a flexible informatics workflow enabling multiplexed image-based analysis of fluorescently labeled cells. The workflow quantifies nuclear and cytoplasmic markers and computes marker translocation between these compartments. Procedures are provided for perturbation of cells using siRNA and reliable methodology for marker detection by indirect immunofluorescence in 96-well formats.

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Keywords: Cell Quantification Fluorescent Markers High-content Microscopy Single-cell Analysis Cell Heterogeneity Cell Profiler Open-source Software Subcellular Segmentation SiRNA Screen G1 Checkpoint Regulators Cell Perturbation Fluorescence-based Cellular Markers
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