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CRISPR-Cas9-based Genome Engineering to Generate Jurkat Reporter Models for HIV-1 Infection with Selected Proviral Integration Sites
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Chapters
- 00:04Title
- 00:42Choice of Targeted Locus, Guide RNA (gRNA), and Targeting Vector Design
- 03:08CRISPR-Cas9-based Targeting of Jurkat Cells
- 04:36Generation of Clonal Lines and Screening for Correct Targeting
- 07:50Screening of Single-cell Clones by Flow Cytometry and PCR
- 11:46Results: Screening and Analysis of Single-cell Clones for Correct Reporter Integration
- 13:16Conclusion
We present a genome engineering workflow for the generation of new in vitro models for HIV-1 infection that recapitulate proviral integration at selected genomic sites. Targeting of HIV-derived reporters is facilitated by CRISPR-Cas9-mediated, site-specific genome manipulation. Detailed protocols for single-cell clone generation, screening, and correct targeting verification are provided.
