JOVE JOURNAL

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Studying Cell Cycle-regulated Gene Expression by Two Complementary Cell Synchronization Protocols

Aintzane Apraiz*¹, Jone Mitxelena*^2,3, Ana Zubiaga²

¹Department of Cell Biology and Histology,University of the Basque Country, UPV/EHU, ²Department of Genetics, Physical Anthropology and Animal Physiology,University of the Basque Country, UPV/EHU, ³Department of Molecular Mechanisms of Disease,University of Zurich

Journal (Genetics)

Genome-wide Mapping of Protein-DNA Interactions with ChEC-seq in Saccharomyces cerevisiae

Sebastian Grünberg¹, Gabriel E. Zentner²

¹Basic Sciences Division,Fred Hutchinson Cancer Research Center, ²Department of Biology,Indiana University

Journal (Genetics)

Quantifying Abdominal Pigmentation in Drosophila melanogaster

Omid Saleh Ziabari¹, Alexander W. Shingleton¹

¹Department of Biology,Lake Forest College

Journal (Genetics)

Retroviral Scanning: Mapping MLV Integration Sites to Define Cell-specific Regulatory Regions

Oriana Romano^1,2, Ingrid Cifola³, Valentina Poletti⁴, Marco Severgnini³, Clelia Peano³, Gianluca De Bellis³, Fulvio Mavilio^1,4, Annarita Miccio^1,2,4,5

¹Center for Genome Research, Department of Life Sciences,University of Modena and Reggio Emilia, ²Laboratory of Chromatin and Gene Regulation During Development,Imagine Institute, ³Institute for Biomedical Technologies,CNR, ⁴Généthon, ⁵Sorbonne Paris Cité - Université Paris Descartes

Journal (Genetics)

Atomic Force Microscopy Investigations of DNA Lesion Recognition in Nucleotide Excision Repair

Jonas Gross*¹, Nicolas Wirth*¹, Ingrid Tessmer¹

¹Rudolf Virchow Center for Experimental Biomedicine,University of Würzburg

Journal (Genetics)

Mapping RNA-RNA Interactions Globally Using Biotinylated Psoralen

Jong Ghut Ashley Aw¹, Yang Shen², Niranjan Nagarajan², Yue Wan¹

¹Stem Cell and Regenerative Biology, Genome Institute of Singapore,A*STAR, ²Computational and Systems Biology, Genome Institute of Singapore,A*STAR

Journal (Genetics)

Leveraging CyVerse Resources for De Novo Comparative Transcriptomics of Underserved (Non-model) Organisms

Blake L. Joyce^1,2, Asher K. Haug-Baltzell³, Jonathan P. Hulvey⁴, Fiona McCarthy⁵, Upendra Kumar Devisetty^1,6, Eric Lyons^1,2,3

¹BIO5 Institute,University of Arizona, ²The School of Plant Sciences,University of Arizona, ³Genetics GIDP,University of Arizona, ⁴Biology Department,University of Massachusetts Amherst, ⁵School of Animal and Comparative Biomedical Sciences,University of Arizona, ⁶CyVerse,University of Arizona

Journal (Genetics)

Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells

Huan-Huan Wei*¹, Yuanlong Liu*¹, Yang Wang², Qianyun Lu¹, Xuerong Yang¹, Jiefu Li¹, Zefeng Wang¹

¹Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology,Shanghai Institutes for Biological Sciences (SIBS), ²Institute of Cancer Stem Cell, Second Affiliated Hospital, Cancer Center,Dalian Medical University

Journal (Genetics)

Single Molecule Analysis of Laser Localized Psoralen Adducts

Jing Huang¹, Himabindu Gali¹, Julia Gichimu¹, Marina A. Bellani¹, Durga Pokharel¹, Manikandan Paramasivam¹, Michael M. Seidman¹

¹Laboratory of Molecular Gerontology,National Institute on Aging, National Institutes of Health

Journal (Genetics)

Using a Fluorescent PCR-capillary Gel Electrophoresis Technique to Genotype CRISPR/Cas9-mediated Knockout Mutants in a High-throughput Format

Muhammad Khairul Ramlee¹, Jing Wang¹, Alice M. S. Cheung¹, Shang Li¹

¹Cancer & Stem Cell Biology Programme,Duke-NUS Medical School

Journal (Genetics)

Transcriptomic Analysis of C. elegans RNA Sequencing Data Through the Tuxedo Suite on the Galaxy Project

Francis R. G. Amrit¹, Arjumand Ghazi¹

¹Department of Pediatrics,University of Pittsburgh School of Medicine, Children's Hospital of Pittsburgh

Journal (Genetics)

Purification of High Molecular Weight Genomic DNA from Powdery Mildew for Long-Read Sequencing

Joanna M. Feehan*^1,2, Katherine E. Scheibel*¹, Salim Bourras³, William Underwood⁴, Beat Keller³, Shauna C. Somerville¹

¹Department of Plant and Microbial Biology,University of California Berkeley, ²John Innes Centre,Norwich Research Park, ³Department of Plant and Microbial Biology,University of Zürich, ⁴USDA-ARS Sunflower and Plant Biology Research Unit

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