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Integration av våt och torr Bench Processer Optimerar Riktade Nästa generations sekvensering av låg kvalitet och låg mängd tumörbiopsier
Journal JoVE
Médecine
This content is Free Access.
Journal JoVE Médecine
Integration of Wet and Dry Bench Processes Optimizes Targeted Next-generation Sequencing of Low-quality and Low-quantity Tumor Biopsies
DOI:

13:24 min

April 11, 2016

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Chapitres

  • 00:05Titre
  • 01:06DNA Functional Quantification and Quality Control
  • 02:55Library Preparation
  • 05:22Library Purification and Size Selection
  • 06:50Library Quantification
  • 08:21Library Normalization and Sample Pooling
  • 09:23Sequencing
  • 11:09Results: High-depth, Multiplexed Sequencing and Sensitive Analysis of Challenging Cancer Specimens by Targeted NGS
  • 13:01Conclusion

Summary

Traduction automatique

An integrated system for targeted next-generation sequencing of oncology specimens is described. This cross-platform system is optimized for low-quality and low-quantity tumor biopsies, accommodates low DNA inputs, includes well-characterized multi-variant controls, and features a novel variant caller that is informed by quantitative pre-analytical quality control measures.

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