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Analyzing Multifactorial RNA-Seq Experiments with DiCoExpress
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05:22 min
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July 29, 2022
DOI:
1Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), Orsay, France, 2Université de Paris, CNRS, INRAE, Institute of Plant Sciences Paris Saclay (IPS2), Orsay, France, 3Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE – Le Moulon, Gif-sur-Yvette, France, 4LSTM, Univ Montpellier, INRAE, IRD, CIRAD, Institut Agro, Montpellier, France, 5Universitté Paris-Saclay, AgroParisTech, INRAE, UMR MIA-Paris, Paris, France
Summary
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DiCoExpress is a script-based tool implemented in R to perform an RNA-Seq analysis from quality control to co-expression. DiCoExpress handles complete and unbalanced design up to 2 biological factors. This video tutorial guides the user through the different features of DiCoExpress.
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Cite this Article
Baudry, K., Paysant-Le Roux, C., Colella, S., Castandet, B., Martin, M. Analyzing Multifactorial RNA-Seq Experiments with DiCoExpress. J. Vis. Exp. (185), e62566, doi:10.3791/62566 (2022).
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