Goh, Y., Fullwood, M. J., Poh, H. M., Peh, S. Q., Ong, C. T., Zhang, J., Ruan, X., Ruan, Y. Chromatin Interaction Analysis with Paired-End Tag Sequencing (ChIA-PET) for Mapping Chromatin Interactions and Understanding Transcription Regulation. J. Vis. Exp. (62), e3770, doi:10.3791/3770 (2012).