Glass Wool Filters for Concentrating Waterborne Viruses and Agricultural Zoonotic Pathogens

1. Preparing the Glass Wool

1. Before and after making each batch of filters, sterilize the work area with 10% bleach solution.
2. Put on gloves and gown. Sterilize a bucket by autoclaving at 121°C and 15 psi for at least 20 minutes. Place the glass wool in the sterile bucket.
3. Saturate the glass wool with reverse osmosis water and let soak for 15 minutes.
4. Drain the reverse osmosis water from the bucket.
5. Saturate the glass wool with 1 M HCl and let soak for 15 minutes.
6. Drain the 1 M HCl from the bucket.
7. Rinse the glass wool with reverse osmosis water.
8. Mix thoroughly.
9. Check the pH using pH paper and repeat the reverse osmosis water rinse until a neutral pH is achieved.
10. Pour off the rinse water.
11. Saturate the glass wool with 1 M NaOH and let soak for 15 minutes.
12. Drain the 1 M NaOH from the bucket.
13. Repeat the reverse osmosis rinse until a neutral pH is achieved.
14. Pour off the rinse water.
15. Instead of a bucket, a glass wool washer can be constructed, which is similar in design to a glass pipette washer (Figure 1).
16. Cover the glass wool completely with sterile Phosphate Buffered Saline (PBS) adjusted to pH 6.8.
17. Use prepared glass wool immediately or store at 4°C. It can be stored for up to two weeks. Before using, make sure the pH is neutral as it will rise over time. If the pH is not neutral, re-rinse with sterile Phosphate Buffered Saline (pH 6.8).

2. Assembling the Glass Wool Filter

1. Drill a 11/16 inch hole into the PVC caps and tap threads so the male adapter nylon fittings can be screwed into the caps. This step is necessary only for the first assembly. Thereafter, the caps can be used for years. Apply Teflon tape to the nylon fittings threads and screw to the caps.
2. Pack the PVC pipe with small pieces of glass wool. Use a metal plunger, like a car engine valve, to pack tight. Packing does not require great force. Pack tight enough so that the glass wool stays in place and channels do not form. However, do not pack so tightly water cannot flow through the filter. When packed appropriately, a flow rate of 4 to 5 liters per minute should be attainable when the filter is attached to water taps with pressures between 40-60 psi. For the size of PVC pipe specified in this protocol, approximately 85 grams washed and packed glass wool is used per pipe. Tare the empty PVC pipe on a top-loading balance and pack with washed glass wool until the pipe mass increases 85 grams.
3. Insert polypropylene mesh into the PVC caps with male adapter nylon fittings attached.
4. Apply Teflon tape to the threaded portions of the PVC pipe.
5. Screw on PVC caps to the PVC pipe and label one filter end the inflow and the other end the outflow. This is important later for the elution step. Which end is labeled inflow does not matter.
6. Push 60 mL of sterile Phosphate Buffered Saline (pH = 6.8) into the filter using a catheter tipped syringe. Excess will come out opposite end.
7. Wrap ends tightly with Parafilm to avoid leaking. Filters can be stored up to 30 days at 4°C.

3. Sampling

1. Sterilize tubing used for sampling by recirculating or immersing items for 30 minutes in 0.525% NaClO (i.e., a 10% solution of standard household bleach). Follow this by draining the hypochlorite solution and neutralize with 0.05% sodium thiosulfate, made by adding 25 mL of a 2% stock anhydrous sodium thiosulfate solution to one liter of reverse osmosis water.
2. For sample water with a pH greater than 7.5, adjust the pH to between 6.5 and 7.0 with HCl. HCl concentration can range from 0.25 M to 1 M. Four liters 0.5 M HCl is generally sufficient for two 800 liter samples, depending on the water’s ambient pH and buffering capacity. Inject HCl during sampling using a peristaltic pump or Venturi (Figure 2). Adjust the pump speed or Venturi opening to achieve the target pH. Measure the pH at the sample line outlet using a field pH meter.
3. Use a prefilter if the glass wool filter clogs from water with high turbidity. (Specifications for the prefilter and its housing are in the Materials list online.) Because pathogens can be attached to particles trapped by the prefilter it must be eluted along with the glass wool filter (see below).
4. Adjust the flow rate to between 2 and 4 liters/minute. Typical sample volumes are between 200 and 1,500 liters.
5. Disconnect the glass wool filter and store in a plastic sterile bag at 4°C for up to 48 hours.

4. Elution

1. Affix the glass wool filter to a ring stand with the sample inflow end pointing downward into a polypropylene bottle. Elute opposite of the direction of sample flow.
2. Push 80 mL of sterile 3% beef extract in 0.05 M glycine with a pH of 9.5 into the filter.
3. Wait 15 minutes.
4. Push another 80 mL of sterile 3% beef extract in 0.05 M glycine with a pH of 9.5 into the filter.
5. Push air thorough the filter until foam comes out of the filter inlet.
6. Adjust the eluate pH to between 7.0 and 7.5 with 1 M HCl.
7. Store eluate at 4°C for up to 24 hours or at -20°C for longer periods of time.
8. Elute the prefilter if one is used. Unscrew the top of the housing cartridge and pour off all residual water inside the housing while holding the prefilter in place with sterile gloved hands.
9. Remove the prefilter from the housing cartridge and slip it into a 15″ x 6″ zip-lock bag.
10. Pour 200 mL of sterile 3% beef extract in 0.05 M glycine with a pH of 9.5 into the bag and seal securely with the zip-lock.
11. Invert the bagged prefilter several times to ensure the entire surface comes in contact with the beef extract.
12. Wait 15 minutes, occasionally inverting and massaging the bagged prefilter.
13. Open the zip-lock. Grip the bag around the prefilter tightly to squeeze out as much beef extract as possible and pull the prefilter out with sterile gloved hands,.
14. Pour the beef extract eluate into a polypropylene bottle.
15. Adjust the eluate pH to between 7.0 and 7.5 with 1M HCl.
16. Store eluate at 4°C for up to 24 hours or at -20°C for longer periods of time. The prefilter eluate can be separately analyzed for pathogens or combined with the glass wool filter eluate.

5. Representative Results

1. Nephelometric Turbidity Unit
2. Enteroviruses enumerated by qPCR as genomic copies/L
3. C. parvum enumerated by immunofluorescence as oocysts
4. S. enterica enumerated by culture as colony-forming-units

Table 1. Glass wool concentration with varying water turbidities and pathogen densities.

1. Measured by qPCR as genomic copies/L

Table 2. Glass wool concentration of avian influenza virus using water from five sites in Alaska.

Figure 1. Diagram of glass wool washer. This can be used instead of a bucket, saving time from rinsing. The concept is similar to a glass pipette washer.

Figure 2. Glass wool filtration with acid injection by peristaltic pump. Note the “T” connector where the pump tubing introduces acid into the sample line between the water tap and glass wool filter. pH adjustment is necessary only if the water sampled has a pH > 7.5.

Glass wool filters are effective in concentrating pathogens from water with a wide range of turbidity levels and pathogen densities (Table 1). To test this, 20 liters dechlorinated tap water was mixed with dried silt loam soil (0, 1.27, or 2.75 g/L) to achieve the desired level of turbidity and then seeded with pathogens at various densities. The water was passed through a glass wool filter, the concentrated pathogens in the eluate were enumerated, and this value was the numerator in the percent recovery calculation. The quantity of pathogens seeded into the water, that is, the denominator of the percent recovery calculation, was determined by first seeding the pathogens into a negative eluate then enumerating the pathogens. The negative eluate was prepared by passing an unseeded 20 liter sample through a filter and eluting. Quantifying the seeded pathogens in a negative eluate avoids differences in pathogen enumeration that could result from matrix differences created by the glass wool filter. The importance of this step when quantifying pathogens by qPCR is discussed in Lambertini et al.³. A 20 liter negative control sample was concentrated via glass wool filtration to determine there were no native pathogens present that could confound the percent recovery calculation. A 10 μm nominal pore size prefilter was used when the turbidity level was ≥ 215 NTU.

Poliovirus was quantified by real-time qPCR using the secondary concentration and nucleic acid extraction procedures and primers and probe described in Lambertini et al.³. Cryptosporidium parvum was quantified in the final concentrated sample volume (FCSV) created by the secondary concentration procedure for poliovirus. Oocysts were visualized by immunofluorescence (MeriFluor Cryptosporidium & Giardia Detection Kit, Meridian Life Science, Inc., Cincinnati, OH). Salmonella enterica was quantified in the FCSV by plating onto XLD agar (Remel, Lenexa, KS) and counting colony-forming-units.

Glass wool filters are effective in concentrating avian influenza viruses (Table 2). Low pathogenicity avian influenza virus (H5N2) was seeded into water from several locations in Alaska and the percent recovery calculated as described above. Secondary concentration and nucleic acid procedures were performed as for poliovirus; the virus was quantified by qPCR using the primers and probe described in Spackman et al.⁴