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Journal (Genetics)
Assisted Selection of Biomarkers by Linear Discriminant Analysis Effect Size (LEfSe) in Microbiome Data
Fang Chang*
1
,
Shishi He*
2
,
Chenyuan Dang
3
1
Marine Resources Research Centre
,
Tianjin Research Institute for Water Transport Engineering, M.O.T.
,
2
Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering
,
North China Electric Power University
,
3
School of Environmental Science and Engineering
,
Huazhong University of Science and Technology
Author
Fang Chang*
1
,
Shishi He*
2
,
Chenyuan Dang
3
Institution
1
Marine Resources Research Centre
,
Tianjin Research Institute for Water Transport Engineering, M.O.T.
,
2
Key Laboratory of Regional Energy Systems Optimization, Ministry of Education, College of Environmental Science and Engineering
,
North China Electric Power University
,
3
School of Environmental Science and Engineering
,
Huazhong University of Science and Technology
AUTHORS
Journal (Genetics)
Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Natália Yumi Noronha*
1
,
Guilherme da Silva Rodrigues*
1
,
Marcela Augusta de Souza Pinhel
1
,
Jean-Baptiste Cazier
2,3
,
Lígia Moriguchi Watanabe
1
,
Albert Nobre Menezes
4
,
Carlos Roberto Bueno
5
,
Carolina Ferreira Nicoletti
1
,
Bruno Affonso Parenti de Oliveira
1
,
Isabelle Mello Schineider
6
,
Isabella Harumi Yonehara Noma
7
,
Igor Caetano Dias Alcarás
8
,
Fernando Barbosa
9
,
Carla Barbosa Nonino
6
1
Department of Internal Medicine, Ribeirão Preto Medical School
,
University of São Paulo
,
2
Centre for Computational Biology
,
University of Birmingham
,
3
Institute of Cancer and Genomic Sciences, College of Medical and Dental Sciences
,
University of Birmingham
,
4
Cancer Genetics and Evolution Laboratory, Cancer Research UK, Institute of Genetics & Molecular Medicine
,
The University of Edinburgh
,
5
Ribeirão Preto School of Physical Education and Sport
,
University of São Paulo
,
6
Health Sciences Department, Ribeirao Preto Medical School
,
University of Sao Paulo
,
7
Faculty of Pharmaceutical Sciences
,
University of São Paulo
,
8
Department of Genetics, Ribeirão Preto Medical School
,
University of São Paulo
,
9
Department of Clinical, Bromatological and Toxicological Analysis, Faculty of Pharmaceutical Sciences of Ribeirao Preto
,
University of São Paulo
Author
Natália Yumi Noronha*
1
,
Guilherme da Silva Rodrigues*
1
,
Marcela Augusta de Souza Pinhel
1
,
Jean-Baptiste Cazier
2,3
,
Lígia Moriguchi Watanabe
1
,
Albert Nobre Menezes
4
,
Carlos Roberto Bueno
5
,
Carolina Ferreira Nicoletti
1
,
Bruno Affonso Parenti de Oliveira
1
,
Isabelle Mello Schineider
6
,
Isabella Harumi Yonehara Noma
7
,
Igor Caetano Dias Alcarás
8
,
Fernando Barbosa
9
,
Carla Barbosa Nonino
6
Institution
1
Department of Internal Medicine, Ribeirão Preto Medical School
,
University of São Paulo
,
2
Centre for Computational Biology
,
University of Birmingham
,
3
Institute of Cancer and Genomic Sciences, College of Medical and Dental Sciences
,
University of Birmingham
,
4
Cancer Genetics and Evolution Laboratory, Cancer Research UK, Institute of Genetics & Molecular Medicine
,
The University of Edinburgh
,
5
Ribeirão Preto School of Physical Education and Sport
,
University of São Paulo
,
6
Health Sciences Department, Ribeirao Preto Medical School
,
University of Sao Paulo
,
7
Faculty of Pharmaceutical Sciences
,
University of São Paulo
,
8
Department of Genetics, Ribeirão Preto Medical School
,
University of São Paulo
,
9
Department of Clinical, Bromatological and Toxicological Analysis, Faculty of Pharmaceutical Sciences of Ribeirao Preto
,
University of São Paulo
AUTHORS
Journal (Genetics)
Quantitative Real-Time Polymerase Chain Reaction Evaluation of MicroRNA Expression in Kidney and Serum of Mice with Age-Dependent Renal Impairment
Katsunori Yanai
1
,
Shohei Kaneko
1
,
Hiroki Ishii
1
,
Akinori Aomatsu
1,2
,
Kenichi Ishibashi
3
,
Yoshiyuki Morishita
1
1
Division of Nephrology, First Department of Integrated Medicine, Saitama Medical Center
,
Jichi Medical University
,
2
Division of Intensive Care Unit, First Department of Integrated Medicine, Saitama Medical Center
,
Jichi Medical University
,
3
Department of Medical Physiology
,
Meiji Pharmaceutical University
Author
Katsunori Yanai
1
,
Shohei Kaneko
1
,
Hiroki Ishii
1
,
Akinori Aomatsu
1,2
,
Kenichi Ishibashi
3
,
Yoshiyuki Morishita
1
Institution
1
Division of Nephrology, First Department of Integrated Medicine, Saitama Medical Center
,
Jichi Medical University
,
2
Division of Intensive Care Unit, First Department of Integrated Medicine, Saitama Medical Center
,
Jichi Medical University
,
3
Department of Medical Physiology
,
Meiji Pharmaceutical University
AUTHORS
Journal (Genetics)
Using Next Generation Sequencing to Identify Mutations Associated with Repair of a CAS9-induced Double Strand Break Near the CD4 Promoter
Changkun Hu*
1
,
Tyler Doerksen*
2
,
Taylor Bugbee
1
,
Nicholas A. Wallace
1
,
Rachel Palinski
2,3
1
Division of Biology
,
Kansas State University
,
2
Kansas State Veterinary Diagnostic Laboratory
,
Kansas State University
,
3
Department of Diagnostic Medicine/Pathobiology
,
Kansas State University
Author
Changkun Hu*
1
,
Tyler Doerksen*
2
,
Taylor Bugbee
1
,
Nicholas A. Wallace
1
,
Rachel Palinski
2,3
Institution
1
Division of Biology
,
Kansas State University
,
2
Kansas State Veterinary Diagnostic Laboratory
,
Kansas State University
,
3
Department of Diagnostic Medicine/Pathobiology
,
Kansas State University
AUTHORS
Journal (Genetics)
An
In Vitro
Approach to Study Mitochondrial Dysfunction: A Cybrid Model
Andrea Cavaliere*
1
,
Silvia Marchet*
1
,
Ivano Di Meo
1
,
Valeria Tiranti
1
1
Unit of Medical Genetics and Neurogenetics
,
Fondazione IRCCS Istituto Neurologico Carlo Besta
Author
Andrea Cavaliere*
1
,
Silvia Marchet*
1
,
Ivano Di Meo
1
,
Valeria Tiranti
1
Institution
1
Unit of Medical Genetics and Neurogenetics
,
Fondazione IRCCS Istituto Neurologico Carlo Besta
AUTHORS
Journal (Genetics)
Reusable Single Cell for Iterative Epigenomic Analyses
Hidetaka Ohnuki
1
,
David J. Venzon
2
,
Alexei Lobanov
3,4
,
Giovanna Tosato
1
1
Laboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
2
Biostatistics and Data Management Section, Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
3
CCR Collaborative Bioinformatics Resource (CCBR), Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
4
Advanced Biomedical Computational Science
,
Frederick National Laboratory for Cancer Research sponsored by the National Cancer Institute
Author
Hidetaka Ohnuki
1
,
David J. Venzon
2
,
Alexei Lobanov
3,4
,
Giovanna Tosato
1
Institution
1
Laboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
2
Biostatistics and Data Management Section, Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
3
CCR Collaborative Bioinformatics Resource (CCBR), Center for Cancer Research, National Cancer Institute
,
National Institutes of Health
,
4
Advanced Biomedical Computational Science
,
Frederick National Laboratory for Cancer Research sponsored by the National Cancer Institute
AUTHORS
Journal (Genetics)
Detection of Post-Replicative Gaps Accumulation and Repair in Human Cells Using the DNA Fiber Assay
Davi J. Martins*
1
,
Stephanie Tirman*
2
,
Annabel Quinet
2
,
Carlos F. M. Menck
1
1
Department of Microbiology, Institute of Biomedical Sciences
,
University of São Paulo
,
2
Division of Oncology, Department of Internal Medicine
,
Washington University in St. Louis
Author
Davi J. Martins*
1
,
Stephanie Tirman*
2
,
Annabel Quinet
2
,
Carlos F. M. Menck
1
Institution
1
Department of Microbiology, Institute of Biomedical Sciences
,
University of São Paulo
,
2
Division of Oncology, Department of Internal Medicine
,
Washington University in St. Louis
AUTHORS
Journal (Genetics)
Rapid Isolation of Wild Nematodes by Baermann Funnel
Sophia C. Tintori*
1
,
Solomon A. Sloat*
1
,
Matthew V. Rockman
1
1
Department of Biology and Center for Genomics & Systems Biology
,
New York University
Author
Sophia C. Tintori*
1
,
Solomon A. Sloat*
1
,
Matthew V. Rockman
1
Institution
1
Department of Biology and Center for Genomics & Systems Biology
,
New York University
AUTHORS
Journal (Genetics)
Determining the Role of Maternally-Expressed Genes in Early Development with Maternal Crispants
Cara E. Moravec
1
,
Gabriella C. Voit
1
,
Francisco Pelegri
1
1
Laboratory of Genetics
,
University of Wisconsin-Madison
Author
Cara E. Moravec
1
,
Gabriella C. Voit
1
,
Francisco Pelegri
1
Institution
1
Laboratory of Genetics
,
University of Wisconsin-Madison
AUTHORS
Journal (Genetics)
Heuristic Mining of Hierarchical Genotypes and Accessory Genome Loci in Bacterial Populations
Natasha Pavlovikj*
1
,
Joao Carlos Gomes-Neto*
2,3
,
Andrew K. Benson
2,3
1
Department of Computer Science and Engineering
,
University of Nebraska-Lincoln
,
2
Department of Food Science and Technology
,
University of Nebraska-Lincoln
,
3
Nebraska Food for Health Center
,
University of Nebraska-Lincoln
Author
Natasha Pavlovikj*
1
,
Joao Carlos Gomes-Neto*
2,3
,
Andrew K. Benson
2,3
Institution
1
Department of Computer Science and Engineering
,
University of Nebraska-Lincoln
,
2
Department of Food Science and Technology
,
University of Nebraska-Lincoln
,
3
Nebraska Food for Health Center
,
University of Nebraska-Lincoln
AUTHORS
Journal (Genetics)
Optimized Bone Sampling Protocols for the Retrieval of Ancient DNA from Archaeological Remains
Cody E. Parker
1,2
,
Kirsten I. Bos
1,3
,
Wolfgang Haak
1,3
,
Johannes Krause
1,3
1
Department of Archaeogenetics
,
Max Planck Institute for the Science of Human History
,
2
School of Human Evolution and Social Change
,
Arizona State University
,
3
Department of Archaeogenetics
,
Max Planck Institute for Evolutionary Anthropology
Author
Cody E. Parker
1,2
,
Kirsten I. Bos
1,3
,
Wolfgang Haak
1,3
,
Johannes Krause
1,3
Institution
1
Department of Archaeogenetics
,
Max Planck Institute for the Science of Human History
,
2
School of Human Evolution and Social Change
,
Arizona State University
,
3
Department of Archaeogenetics
,
Max Planck Institute for Evolutionary Anthropology
AUTHORS
Journal (Genetics)
Use of the Pyrimidine Analog, 5-Iodo-2′-Deoxyuridine (IdU) with Cell Cycle Markers to Establish Cell Cycle Phases in a Mass Cytometry Platform
Raymond D Devine
1
,
Gregory K Behbehani
1
1
Ohio State Comprehensive Cancer Center, Division of Hematology
,
The Ohio State University
Author
Raymond D Devine
1
,
Gregory K Behbehani
1
Institution
1
Ohio State Comprehensive Cancer Center, Division of Hematology
,
The Ohio State University
AUTHORS
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