Kuga et al. discovered that phosphorylation-status specific antibodies against the actin binding protein girdin phosphorylated at tyrosine 1798 (pY1798) can be used to label tuft cells (TCs). This protocol allows robust visualization of TCs using immunofluorescent staining of free-floating jejunum cryosections with pY1798 antibodies.
The actin binding protein girdin is a cytosolic protein that is required for actin remodeling to trigger cell migration in various tissues. Girdin is phosphorylated by both receptor and non-receptor tyrosine kinases at tyrosine 1798. Omori et al. developed site- and phosphorylation status-specific antibodies against human girdin at tyrosine-1798 (pY1798), which specifically bind to phosphorylated tyrosine-1798, but not to unphosphorylated tyrosine-1798. pY1798 antibodies have been used to specifically label tuft cells (TCs) that are present in mammalian gastrointestinal tissues, but the function of these cells is unclear. This protocol allows the robust visualization of TCs in the jejunum using pY1798 antibodies and immunofluorescence. To ensure successful and simple TC visualization, this protocol includes two histological techniques: production of free-floating cryosections from gelatin-filled jejunum tissue, and low-temperature antigen retrieval at 50 °C for 3 h. Filling the jejunum with gelatin maintains the shape of free-floating sections throughout the staining procedure, whereas low-temperature antigen retrieval ensures robust signals from TCs. Successful use of this protocol results in pY1798 staining of TCs distributed from villus tip to crypt. Stained TCs have a spool-shaped soma and fluorescent signals condense at the lumenal tip, which corresponds to the protruding 'tuft.' Phalloidin staining colocalized with pY1798-positive TCs at the thickened brush border, and corresponds to a rootlet mass extending from the TC tuft. This protocol could be used to examine TCs in human biopsy samples collected with gastrointestinal endoscopes. Furthermore, TCs were recently reported to accumulate following parasite infection in mice, suggesting that this protocol could have applications for diagnosis of parasite infections in the human gut.
Tuft cells (TCs) are minor scattered components of gastrointestinal epithelia that are characterized by apical tufts and spool-shaped somas1. Although TCs were first described in 19562, TC function remains unclear, partly due to a lack of reliable TC markers.
Enomoto et al. first characterized the actin binding protein girdin3, which is expressed in the nervous system, as well as in non-neural tissues such as blood vessels, heart valves, tendons, and skeletal muscle4. Mice with genetic ablation of girdin display growth retardation and multiple brain anomalies4,5,6. Meanwhile, loss-of-function mutation in human girdin is associated with progressive encephalopathy, severe retardation, and early onset epileptic seizures7.
In 2011, Lin et al. identified dynamic phosphorylation of girdin at tyrosine 1798 mediated by tyrosine kinases such as EGFR and Src8. They also showed that phosphorylated girdin is required for actin remodeling to trigger cell migration8. Omori et al. developed site- and phosphorylation status-specific antibodies against human girdin phosphorylated at tyrosine 1798 (pY1798 antibodies) following Goto's protocol, and validated the antibodies using site-directed mutagenesis of expression vectors carrying full-length girdin9,10. In 2017, Kuga et al. reported that pY1798 labels TCs with high specificity and high sensitivity1. The pY1798 antibodies were shown to be superior to previous TC markers based on excellent staining properties that revealed the whole cell shape, including the characteristic 'tuft' on the lumenal tip, yet the biological role of girdin and phospho-girdin in TC function remained unclear1.
The method described in this study involves immunofluorescence staining, a histological technique to mark a specific protein on tissue using a primary antibody against a target protein and a fluorescence-conjugated secondary antibody against the primary antibody. The purpose of this method is to allow researchers with limited histological experience to obtain high quality TC images. This protocol uses free-floating cryosections that avoid the need for slide-mounted cryosections, or paraffin section. However, free-floating sections are fragile due to the absence of support from a glass slide and the section thickness can lessen antibody permeability. This protocol includes two approaches that overcome these issues: 1) filling the entire jejunum lumen with gelatin to preserve the morphology of free-floating sections throughout the staining procedures, and 2) use of low-temperature antigen retrieval to intensify pY1798 signals.
All methods described here were approved by the Animal Care and Use Committee of the Institute for Developmental Research, Aichi Human Service Center (application number: M-03).
1. Preparations
2. Animal Dissection and Isolation of Jejunum
3. Snap Freezing of Gelatin-filled Jejunum Tissues
4. Immunofluorescence of Tuft Cells Using Free-floating Cryosections
5. Confocal Microscopy
Gelatin-filling of the jejunum
A typical procedure for filling mouse jejunum with gelatin is shown (Figure 1A), as are the benefits of gelatin-filling (Figure 1B). In brief, the beveled tip of an 18-gauge straight needle was removed to protect against piercing the gut wall (Figure 1A1). Gelatin filling was achieved using 10% buffered neutral formalin solution injected from one end of a clipped jejunum section to flush the intestine and to fix the gut lumen surface (Figure 1A2) prior to filling with liquid gelatin (Figure 1A3). The resulting sausage-like pieces (Figure 1A4) were embedded, frozen, and transversely sectioned into 30 µm-thick slices in a cryostat. In the absence of gelatin filling, jejunal sections tend to kink, allowing the villi to swing backward (Figure 1B, left). Gelatin filling preserves the round disc-shape of the sections and maintains upright positioning of the villi (Figure 1B, right). The images clearly indicate the benefit afforded by gelatin filling in preserving the morphology of free-floating jejunum sections.
Successful imaging of intestinal tuft cells
pY1798 antibodies can be applied for variable immunostaining techniques, including dot blotting, western blotting, paraffin section staining, thaw-mounted cryosection staining, or free-floating cryosection staining1,9. In this protocol, we focused on free-floating cryosections for fluorescence staining of TCs in mouse jejunum using pY1798 antibodies, phalloidin, and DAPI staining to demonstrate the structural characteristics of TCs1. In general, TCs are scattered at a rate of approximately one TC/100 epithelial cells from villus tip to crypt1. The representative results show that pY1798 reproducibly delineates entire TCs, including the membrane, cytoplasm of the spool-shaped soma, and the strongly stained lumenal tip, where robust signal condensation corresponds to the protruding 'tuft' of a TC1 (Figure 2A-2B). Meanwhile, phalloidin is a phallotoxin, a family of poisonous bicyclic heptapeptides from the mushroom Amanita phalloides, and has high affinity for filamentous actin (F-actin), which is present in microvilli that form the intestinal brush border11. Phalloidin reproducibly and prominently marks the thickened brush border that corresponds to a mass of rootlets extending from the tuft1. Thus, the consistent co-localization of pY1798 signals (spool-shaped soma, signal condensation at the lumenal tip) with the prominently thickened phalloidin-positive brush border demonstrates that this protocol successfully identifies TCs regardless of whether they are located on a villus (Figure 2A) or in a crypt (Figure 2B).
Low-temperature antigen retrieval is effective for staining free-floating sections
Heat-based antigen retrieval at 95 – 99 °C is widely used for analysis of paraffin sections and slide-mounted cryosections. However, applying this approach to free-floating sections without causing damage is difficult because such sections are generally more fragile than slide-mounted sections that are supported by the slide12. Since low-temperature antigen retrieval (50 °C for 3 h) using a water bath did not affect the morphology of the free-floating jejunum sections in preliminary experiments, we evaluated the objective effectiveness of antigen retrieval in a blind test, which statistically confirmed the effectiveness of low-temperature antigen retrieval (Figure 3).
Figure 1: Gelatin filling of jejunum sections for morphological preservation of cryosections
(A) Photographs of procedures for intraluminal filling of mouse jejunum with gelatin. (A1) The beveled tip of an 18-gauge straight needle was removed to avoid piercing the gut wall. (A2) Buffered neutral formalin solution (10%) was injected in one end of the clipped jejunum to flush the intestinal contents and fix the gut lumen surface. (A3) Clipped jejunum filled with liquid gelatin and both ends ligated using a 6-0 nylon suture (black arrows). (A4) Four more suture knots (white arrows) placed between the pre-existing suture knots (black arrows) yielded three shorter pieces. The tissue will then be separated into three sausage-like pieces at the two indicated positions (white arrowheads). (B) Beneficial effects of gelatin-filling on free-floating cryosection morphology. Without gelatin filling, sections tend to kink, allowing the villi to easily swing backward (left); with gelatin filling, a 30 µm-thick section maintains a disc shape and the upright position of the villi is preserved (right). Images were photographed using Nomarski differential interference contrast. Scale bars, 1 mm. Please click here to view a larger version of this figure.
Figure 2: Representative fluorescence images of mouse intestinal tuft cells
Confocal fluorescence images of TCs on a villus (A) or in a crypt (B), in free-floating mouse jejunum sections stained with site-specific and phosphorylation-status-specific antibodies against girdin phosphorylated at tyrosine 1798 (pY1798, green, optimal excitation/emission wavelengths 490/525 nm), phalloidin (red, 590/617 nm), 4,6-diamidino-2-phenylindole (DAPI, blue, 358/461 nm). The area enclosed by white boxes in the low magnification images (scale bars, 50 µm) is expanded on the right (scale bars, 10 µm). pY1798 antibodies reproducibly stain TCs, regardless of location (on a villus (A), or in a crypt (B)), with staining present at the lumenal tip (arrows), membrane, and cytoplasm of the spool-shaped TC soma. A prominently thickened brush border in phalloidin staining (arrowheads) is another distinctive sign of TCs. Please click here to view a larger version of this figure.
Figure 3: Low-temperature antigen retrieval enhances pY1798 immunofluorescence
Two groups of experimental procedures were compared to confirm the effectiveness of low-temperature antigen retrieval. Free-floating jejunum sections (30 µm thick, n = 13) from a single frozen block were divided into two groups, and sections from each group were stained following the complete protocol or the same protocol lacking low-temperature antigen retrieval (step 4.2.2). After staining, sections were mounted on individual slides labelled with group numbers, and the labelling on each slide was covered with masking tape. All slides were shuffled, labelled with new numbers on the tape, and observed under fluorescence microscopy through an FITC filter. Total counts of visible pY1798-positive TCs were averaged in each group, and were displayed in a bar graph (mean ± standard deviation). A two-tailed t-test was performed to compare the average counts between the two groups. P-values below 0.05 were considered statistically significant. Low-temperature antigen retrieval significantly improved the effectiveness of pY1798-immunofluorescence. Please click here to view a larger version of this figure.
This protocol was designed to allow researchers without histology experience to obtain reliable images of tuft cells (TCs). This protocol has three critical points: 1) The use of site- and phosphorylation status-specific rabbit polyclonal antibodies against human girdin phosphorylated at tyrosine 1798 (pY1798 antibodies) that were obtained from a specific company (Immuno-Biological Laboratories = Company X); 2) Gelatin filling of the jejunum; and 3) Low-temperature antigen retrieval. In the broadest sense, phosphorylation status-specific antibodies can be categorized as modification-specific antibodies that recognize a specific type of post-translational modification (e.g. acetylation, methylation, or phosphorylation) of a protein at a specific amino acid residue. Omori et al. and company X jointly generated pY1798 antibodies by immunizing rabbits with phosphorylated peptide, and purifying the resulting antibodies using solid-phase chromatography with an unphosphorylated peptide following Goto's method9,10. pY1798 antibodies were intensively validated with in vitro phosphorylation assays using full-length human girdin expression vectors with/without a point mutation at tyrosine 17989. Subsequently, Kuga et al. found that pY1798 antibodies from company X are a specific and sensitive marker of intestinal TCs1. Thus, inclusion of pY1798 antibodies from company X is a critical point in this protocol.
Gelatin contains collagen extracted from animal tissues and has long been used to embed tissue specimens for histochemical studies using cryosections13. Low-melting-point gelatin, which is gelatinized at 4 °C but melts at room temperature, began to be applied to avoid adverse effects of heat needed to maintain the gelatin in a liquid state during embedding14. In this protocol, low-melting-point gelatin made from gelatin powder that gelatinizes at 4 °C and melts at RT was used to preserve the morphology of transverse cryosections of mouse jejunum. When this gelatin was used to completely fill the jejunum, samples were then formalin-fixed to achieve irreversible gelatinization. Heat-induced antigen retrieval is an effective method to expose antigens that are masked by aldehyde-containing fixatives12. However, the high temperatures (95 – 99 °C for 30 min) commonly used for analysis of paraffin sections can damage the morphology of the tissue/gelatin complex. Here we used low-temperature antigen retrieval (50 °C for 3 h) that allows both antigen retrieval and preservation of tissue morphology.
pY1798 antibodies can label TCs not only in mouse jejunum, but also in multiple organs (stomach, ileum, colon, and gallbladder) from mice and humans1. However, because pY1798 signals in unfixed tissues from any tissue will rapidly degrade, this protocol includes formalin injection into the jejunum lumen (step 2.1.15., Figure 1A2).
There are limitations associated with the thickness of free-floating cryosections. Although thin cryosections can be advantageous in terms of translucency for microscopy, the thinness makes these sections physically vulnerable. In contrast, thick cryosections are physically sturdy, but have lower antibody permeability into the section. In this protocol, 30 µm-thick sections were used that were both physically stable and permeable to antibodies. Although this method was designed for researchers without extensive experience in histology, if the protocol should fail, pY1798/villin/DAPI triple staining of paraffin sections similar to that used by Kuga et al. could be performed1. Paraffin sections were not used here to avoid difficulties associated with phalloidin staining of F-actin in paraffin sections.
Due to the conservation of amino acid sequences adjacent to girdin tyrosine-1798, pY1798 antibodies can be applied to stain TCs in species other than mouse, including rat and human. The gelatin filling used in this protocol can also be applied for other hollow organs. Indeed, apart from pY1798 or TC, the combination of gelatin filling with low temperature antigen retrieval may be useful for revealing notoriously "difficult" epitopes in the mouse gut, and as a consequence, may be of interest for many researchers.
The biological role of girdin and the significance of its phosphorylation in TCs is unclear. However, a study by Lin et al. suggested that tyrosine phosphorylation of girdin is associated with the degree of F-actin polymerization8. Meanwhile, Kuga et al. found that lethal doses of apoptosis inducers (e.g., cisplatin, X-ray radiation) caused a large increase in the relative frequency of TCs in the mouse small intestine that they hypothesized may be associated with the possible conversion from enterocytes to TCs, in synchronization with the phosphorylation of girdin in microvilli1. This possibility will require additional investigation in the future. Three groups recently observed rapid increase in TC frequency following parasite infection15,16,17. Thus, this free-floating staining could be used not only to analyze endoscopically-collected human gut tissues, but TC accumulation could also aid in diagnosis of parasite infection in the human gut.
The authors have nothing to disclose.
We thank Naoya Asai at Nagoya University for providing useful suggestions for the development of low-temperature antigen retrieval for free-floating jejunum sections. This work was supported by Grants-in-Aid for Scientific Research (KAKENHI) (C) in 2012 (JP25460493) and (B) in 2017 (JP17H04065) from the Japan Society for the Promotion of Science (JSPS), A-STEP grants in 2014 (AS251Z02522Q) and in 2015 (AS262Z00715Q) from the Japan Science and Technology Agency (JST), and a Takeda Visionary Research Grant 2014 from the Takeda Science Foundation (to M.A.).
Slc:DDY 6-week-old female mice | Chubu Kagaku Shizai | Not applicable | |
Disodium hydrogenphosphate 12-water (Na2HPO412H2O) | Wako | 196-02835 | |
Sodium dihydroenphosphate Dihydrate (NaH2PO42H2O | Wako | 199-02825 | |
Sodium chloride (NaCl) | Wako | 199-10665 | |
Triton X-100, Polyoxyethylene(10) octylphenyl ether | Katayama Chemical | Not applicable | |
Sucrose | Wako | 190-00013 | |
10% buffered neutral formalin solution | Muto Chemical | 20215 | Step 1.3. |
Phalloidin-fluorescent dye conjugate, Alexa Fluor 594 phalloidin | ThermoFisher Scientific | A12381 | |
Methanol | Nacalai Tesque | 21915-35 | |
DAPI (4',6-diamidino-2-phenylindole, dihydrochloride) | ThermoFisher Scientific | D1306 | |
N.N-dimethylformamide (DMF) | Nacalai Tesque | 13015-75 | |
Bovine serum albumin | Sigma | A9647-10G | |
18-gauge stainless steel straight needle | Terumo | NN-1838R | |
U.S.P. 6-0, 60 cm nylon cut suture, Crownjun | Kono Seisakusho | Not applicable | |
22-gauge winged needle | Terumo | SV-22DLK | |
20 mL TERUMO syringe | Terumo | SS-20ES | |
50 mL centrifuge tube | TPP | 91050 | |
15 mL Iwaki centrifuge tubes | Iwaki | 2325-015 | |
1.5 mL micro test tube | Star | RSV-MTT1.5 | |
Gelatin powder, Gelare-blanc | Nitta Biolab | 2809 | |
Embedding compound for frozen tissue specimen, O.C.T. Compound 118 mL 12 piece | Sakura FineTech | 4583 | |
Cryomold, CRYO DISH No. 3, 125 piece, well size 20 x 25 x 5 (mm) | Shoei Work's | 1101-3 | |
Isopentane | Nacalai Tesque | 26404-75 | |
Falcon cell culture dish 35 x 10mm Easy-Grip | Corning | 353001 | |
Antigen retrieval solution concentrate, Target Retrieval Solution pH 9 10x | Dako | S2367 | Antigen retrieval solution concentrate in step 4.2.2. |
Protein Block | Dako | X0909 | Blocking solution in 4.2.5. |
Phospho-Y1798 girdin (pY1798) antibodies | Immuno-Biological Laboratories (IBL) = Company X | 28143 | Phospho-Y1798 girdin antibodies in step 4.2.6. |
Goat anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 | ThermoFisher Scientific | A11034 | |
Aquous mounting media, Prolong Gold Antifade Mountant | ThermoFisher Scientific | P36930 | |
Coverslips, Matsunami Micro Cover Glass 22 x 22 mm 100 pcs Thickness No.1 | Matsunami Glass | C022221 | |
Entellan New, xylene-based mounting media for microscopy | Merck Millipore | 107961 | |
MAS-coated slide glass white | Matsunami Glass | MI-MAS-01 | |
Wooden Mappe KO-type | Shoei Work's | 99-40007 | |
Immersion Oil 518 F Fluorescence Free 20 ml | Zeiss | 444960 | |
Pipettes, Pipetman P (P2, P20, P200, P1000) | Gilson | F144801, F123600, F123601, F123602 | |
Ultrapure water production system | Advantec | GS-590 | |
Plastic glove, Star Nitrile Glove | Star | RSU-NGVM | |
Cryostat | Leica Microsystems | CM1950 | |
Deep freezer, SANYO Ultra Low | Sanyo | MDF-382 | |
Showcase refrigerator | Nihon Freezer | NC-ME50EC | |
Water bath, Thermominder SDminiN (to dissolve gelatin at 50 C) | Taitec | 0068750-000 | |
Hybridization incubator (for antigen retrieval at 50 C) | Taitec | HB-100 | |
Incubation chamber for immunostaining | Cosmo Bio | 10DO | |
Reciprocal shaker for immunohistochemistry (for room temperature) | Taitec | NR-1 | |
Reciprocal shaker for immunohistochemistry (for 4 C) | Tokyo Rika Kikai | MMS-3010 | |
Stereoscopic microscope (for tissue handling) | Olympus | SZ61 | |
Stereoscopic microscope (for Figure 1B) | Leica Microsystems | M165FC | |
Fluorescence microscope (for Figure 3) | Nikon | E800 | |
Confocal laser-scanning microscope | Zeiss | LSM700 |