Methods for the Study of the Zebrafish Maxillary Barbel

Zebrafish husbandry

Zebrafish are housed and reared according to standard methods ¹. Past the late larval period, the developmental stage of a zebrafish can be measured by its standard length (SL), or the straight line distance in millimeters from the anteriormost point of the upper lip to the base of the caudal fin (posteriormost hypural plate)². At approximately one month post fertilization (10-12 mm SL), the nasal and maxillary barbels appear as transparent epithelial buds near the olfactory pits and on the posterior corners of the maxillae, respectively. As the zebrafish matures, the barbels extend into narrow, whisker-like appendages. Because the maxillary barbel is larger (2-3 mm) and easier to manipulate, our protocol applies only to this particular appendage; similar techniques, however, could be adapted to the smaller nasal barbel.

Barbel Clipping

1. Anaesthetize adult zebrafish at the desired stage (e.g., 1.5-2.5 cm SL, ~3-6 months post-fertilization) by immersion in 0.015% MS-222 (ethyl 3-aminobenzoate methanesulfonate) buffered to pH 7.0 in system water. Observe until swim movements stop and gill ventilation becomes slow and regular. Depending on fish size, complete anesthesia takes approximately 2-5 minutes.
2. Using an aquarium fishnet, transfer 1-3 fish at a time to a folded piece of wet paper towel in a Petri dish. Using a blunt spatula, orient the fish so they are parallel to each other and left lateral side up. Fold part of the wet paper towel over the caudal part of the fish, covering the entire body up to the operculum (gill covers) to keep the skin and gills moist during the procedure.
3. View the Petri plate under the stereomicroscope, using low-angle incident light to illuminate the head region. Focus on the base of the left maxillary barbel, which protrudes from the posterior ventral corner of the maxilla (Fig. 1).
   
   Figure 1.
4. Tightly grasp the shaft of the barbel slightly distal to the edge of the maxilla. Elevate the barbel shaft and insert the jaws of a fine-tipped spring scissors just proximal to the forceps. The scissors can be touched to the forceps for stability. Slide the jaws of the scissors along the shaft of the barbel until the cutting edge approaches the edge of the maxilla. Close the scissors to cut through the barbel shaft. The amputated barbel, still gripped in the forceps, can be removed for fixation or further observation.
5. Immediately transfer the fish to a small tank of clean system water (~500 mL) containing one drop of methylene blue to control superficial fungal infection. Allow the fish to recover overnight. The next morning, return the fish to the rearing system. Barbel regeneration is maximal after 2 weeks.

Agar Embedding of Matched Barbel Pairs

1. Collect fish by appropriate euthanasia technique and fix in a 50 mL tube of 4% paraformaldehyde-phosphate buffered saline (PBS) with agitation at 4°C overnight. The fixative volume should be at least ten times the volume of the tissue. After fixation, dispose of paraformaldehyde waste in an approved container and rinse the tissue thoroughly in several changes of PBS.
2. Prepare in a 250 mL glass flask 150 mL of 2% agarose (T_m ~37°C) in distilled water. Heat with a microwave or hot plate, agitating periodically until completely dissolved. Equilibrate the molten solution in a 50-60°C water bath.
3. Assemble a standard gel electrophoresis rig by placing a small gasketed gel mold (10 x 10 cm; ~100 mL gel volume) firmly against the sides of the buffer chamber. Add 2-4 small-toothed sample combs (4 x 1.5 mm).
4. On a level surface, pour the melted agarose into the mold to just cover the base of the combs, forming very shallow wells. Immediately put the leftover agarose back into the warm water bath; this will be used later to embed the tissue (Steps 9-12). Put a long glass Pasteur pipette into the flask to keep the pipette to the same temperature as the agarose.
5. Allow the gel to harden for 20-30 minutes. Remove the combs, then remove the gel mold containing the hardened gel from the buffer chamber. Firmly tape the open sides of the gel mold with laboratory tape so the gel does not slide out. This tape should extend several millimeters over the surface of the agarose so that additional agarose can be added later (Step 13).
6. Position the gel mold on the stage of a stereomicroscope. Magnify an empty well and bring the edges into focus.
7. Onto the surface of the agarose adjacent to the well, pipette a drop of water or buffer containing the fixed barbel specimens (e.g., regenerate and control). Using bent insect pins, drag the moist specimens into the well and push them to the bottom. Orient the barbel shafts parallel to each other and aligned against opposite long edges of the well. Surface tension will help hold the tissue in position.
8. When ready to embed, use a fine pipette tip or the corner of a laboratory tissue to remove excess fluid from the well. Work quickly so as not to let the tissue dry out.
9. Using the warmed glass Pasteur pipette, gently pipette fresh molten agarose in and around the specimens to seal the barbel tissue in place. Do not overfill. Before the agarose hardens, make last-minute adjustments with the insect pins.
10. Place a numbered paper specimen label next to the well and secure it with a small drop of agarose.
11. Repeat steps 6 through 10 for each well of specimens.
12. If desired for image calibration, insert a piece of paper with a printed micrometer scale (e.g., http://incompetech.com/graphpaper/multiwidth/) into the bottom of an empty well. Flatten the paper to the bottom of the well and cover it with warm agarose.
13. After all of the specimens are embedded, the surface of the gel will be irregular, with hardened drops of agarose. Place the gel on a flat surface and gently pour in additional melted agarose until the upper surface is uniform. Use the smallest amount of agarose necessary to obtain a smooth surface; too much agarose will obscure transmitted-light photography. Allow this top layer to harden.
14. The gel can now be photographed on the stage of a stereomicroscope to record gross morphology for each barbel pair. Image calibration is obtained by photographing the embedded micrometer scale.
15. The entire gel can be stored wrapped in wet paper towels and sealed in a plastic bag at 4° for several weeks.
16. For further analysis, agar blocks containing matched pair of barbels can be cut out of the gel with a scalpel or razor blade and processed for paraffin histology or cryosectioning by standard methods^3,4. Alternatively, individual barbels can be dissected out of the agarose with fine needles, rinsed in water, and processed for other downstream applications (e.g., whole-mount immunohistochemistry or confocal microscopy).