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Automatic Identification of Dendritic Branches and their Orientation
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JoVE Journal Neurowissenschaften
Automatic Identification of Dendritic Branches and their Orientation

Automatic Identification of Dendritic Branches and their Orientation

DOI:
10.3791/62679-v

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06:08 min

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September 17, 2021

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, ,
1Department of Molecular Biology,Ariel University, 2Department of Physics,Ariel University

Kapitel

  • 00:04Introduction
  • 00:59Opening the SOA Application and Image to Analyze
  • 01:48Segmentation Optimization
  • 02:31Create Output Files
  • 02:56Navigation Toolbar
  • 04:24Results: Classification of Dendritic Branch Parallel Growth vs. Random Simulation and SOA’s Display of Various Parameters
  • 05:45Conclusion

Summary

Automatische Übersetzung

Automatische Übersetzung

Presented is a computational tool that allows simple and direct automatic measurement of orientations of neuronal dendritic branches from 2D fluorescence images.

Tags

Keywords: Dendritic BranchesOrientationSOAAutomated Tool2D Line NetworksSegmentationMorphological InformationNon-neural CellsCytoskeletonNanotubesThresholdMerge LinesMinimum DistanceMinimum AngleSegmentation OptimizationOutput FilesPanningZooming

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