C. elegans is a useful model for studying the effects of ethanol on behavior. We present a behavioral assay that quantifies the effects of ethanol on the locomotion speed of crawling worms; both initial sensitivity and the development of acute functional tolerance to ethanol can be measured with this assay.
Alcohol use disorders are a significant public health concern, for which there are few effective treatment strategies. One difficulty that has delayed the development of more effective treatments is the relative lack of understanding of the molecular underpinnings of the effects of ethanol on behavior. The nematode, Caenorhabditis elegans (C. elegans), provides a useful model in which to generate and test hypotheses about the molecular effects of ethanol. Here, we describe an assay that has been developed and used to examine the roles of particular genes and environmental factors in behavioral responses to ethanol, in which locomotion is the behavioral output. Ethanol dose-dependently causes an acute depression of crawling on an agar surface. The effects are dynamic; animals exposed to a high concentration demonstrate an initial strong depression of crawling, referred to here as initial sensitivity, and then partially recover locomotion speed despite the continued presence of the drug. This ethanol-induced behavioral plasticity is referred to here as the development of acute functional tolerance. This assay has been used to demonstrate that these two phenotypes are distinct and genetically separable. The straightforward locomotion assay described here is suitable for examining the effects of both genetic and environmental manipulations on these acute behavioral responses to ethanol in C. elegans.
Alcohol use disorders (AUD) are widespread and produce serious health, social, and economic problems. In humans, the susceptibility to developing an AUD is heavily influenced by both genetics and the environment1,2. A strong physiological predictor of abuse liability is the initial level of response (LR) to alcohol (ethanol) that is exhibited by naïve drinkers3-5. This LR phenotype is influenced by genetics and non-genetic components6. Determining the molecular mechanisms that influence the LR to ethanol is an important goal of the study of ethanol response behaviors.
The nematode, Caenorhabditis elegans, has been increasingly used as a model for studying the effects of ethanol on behavior7-9. There is strong molecular conservation in the machinery of nervous system function between worms and mammals, and several genes that have been shown to influence the LR to ethanol in worms have been shown to influence LR to ethanol in mammals10-16, and have been implicated in abuse liability in humans17-19.
Ethanol intoxicates worms, which is reflected in a decrease in their locomotion speed. Several different laboratories have developed behavioral assays that differ in several ways, for example, the locomotion behavior that they study (crawling versus swimming11,12,14,20,21) or in the composition of the solutions in which the assays are performed (nematode growth medium versus Dent’s saline20,22). Interestingly, these diverse assays have yielded somewhat different dose response profiles for the effects of ethanol. These results have pointed to important differences in the underlying behaviors of crawling and swimming9,23, as well as a role for the environmental variable osmolarity in ethanol responses20, and have highlighted the importance of describing experimental detail of the various assays.
An assay to measure the acute effects of ethanol on crawling behavior is presented here. This assay has been used extensively to study the genetic and environmental influences on the LR to ethanol8,10,20,24,25. The mammalian LR phenotype is a composite of at least two components, initial sensitivity to ethanol and acute functional tolerance to ethanol26,27. In worms, the LR phenotype has been shown to be separable into these two components through the use of this behavioral assay. The influences of genetic and environmental manipulations on both phenotypes can be examined using this single assay. Importantly, these two phenotypes are genetically separable.
1. Steps to Perform on the Day before the Assay
2. Steps to Perform on the Day of the Assay
Representative data (Figure 1) from several different genotypes and their paired controls are presented8,24; data were specifically chosen that highlight differences in the assayed animals. The degree of effect at 10 min of exposure is considered the initial sensitivity of a strain, which is shown on the left axes in Figure 1B-G. Mutant strains with a relative speed larger than the control at 10 min are considered to be ethanol resistant (Figure 1F, G), while mutant strains with a relative speed that is less than the control are considered to be hypersensitive to ethanol (Figure 1D, E). The right axes in Figure 1 show the degree of recovery of speed between the 10- and 30-min time periods. This represents a measure of the rate of development of acute functional tolerance (AFT) and is calculated as the relative speed at 10 min subtracted from the relative speed at 30 min. Strains with larger recovery values are considered to have a more rapid rate of development of AFT compared with control animals (Figure 1D, F) and strains with lower recovery values than the control animals are considered to have lower rates of development of AFT (Figure 1C, E). Note that the measured AFT for sbp1(ep79) (Figure 1G) is trending toward a negative recovery but was not statistically different from wild type due to large variance (p =0.08 for comparison against N2 recovery). tub-1 encodes a TUBBY homolog; bbs-1 encodes a homolog to human BBS1; lips-7 encodes a triacylglycerol lipase; fat-1 encodes an omega-3 fatty acyl desaturase; fat-3 encodes a delta-6 fatty acid desaturase; sbp-1 encodes a homolog to human Sterol Regulatory Element Binding Proteins (SREBPs).
There are several important characteristics of the data to note: First, the N2 (wild-type) control data differs across experiments; this is likely to be due to environmental factors that are difficult to control, such as absolute water content or salt concentration of the dried media and temperature in the laboratory. Typically, 400 mM exogenous ethanol depresses the speed of N2 to approximately 30% of the untreated controls; however the absolute degree of depression varies from experiment to experiment. Further, while approximately 12% recovery of locomotion speed over 30 min in N2 is usually expected, here again the numbers vary. Importantly, while the absolute levels of sensitivity and AFT exhibit day-to-day variation, the comparisons between genotypes or conditions do not generally differ. That is, wild-type and a mutant will always have similar effects relative to each other; if a mutant causes a decrease in AFT relative to wild-type, that decrease will scale with the amount of AFT demonstrated by wild type. This highlights the importance of performing paired controls on the same plates at the same time for strains or conditions that are being compared.
Second, the phenotypes of initial sensitivity and AFT are genetically separable. Note that initial sensitivity and acute functional tolerance can vary together or separately; examples have been included of a variety of phenotypes in which initial sensitivity and AFT differ independently. An alteration in one of the phenotypes does not predict a change in the other phenotype, nor does it predict the direction of change of the second phenotype (either increased or decreased response to ethanol).
Figure 1. Initial ethanol sensitivity and the rate of development of acute functional tolerance (AFT) are separable behavioral responses. (A) Summary table for the direction of effects of mutations in the named genes on the level of initial sensitivity to ethanol and the rate of development of AFT, both are in comparison with the wild-type controls (N2 in each case). (B–G) Acute locomotion responses to 400 mM exogenous ethanol are measured at 10-12 min and 30-32 min of continuous ethanol exposure. Relative speeds (% of untreated speed) are shown on the left axes. The degrees of recovery in speed are shown on the right axes and represent a measure of the rate of AFT during that 20-min interval. The number of trials compared is as follows: B, C, E: n = 6; G: n = 7; D: n = 9; F: n = 11. Statistically significant comparisons (paired t-tests) are shown: *, p < 0.05; **, p < 0.01. 8,24 The data presented in this figure are modified from 8,24. Please click here to view a larger version of this figure.
The simple neurobiology and genetic tools available in C. elegans make the worm an excellent model in which to study the molecular bases of the effects of ethanol on behavior. Here, we describe an assay that has been used to identify several molecular and environmental mediators of the acute behavioral response to ethanol8,10,20,24,25. This method allows the differentiation and simultaneous examination of two different ethanol response behavior phenotypes, initial sensitivity and the development of acute functional tolerance, that together model the composite phenotype of level of response in mammals. The same assay could be easily adapted to study other pharmacological agents, thereby taking advantage of the simultaneous testing of multiple strains in the assessment of the behavioral effects of other drugs.
The 10-12 min time window provides a useful time point to measure initial sensitivity of a strain to ethanol. Analysis of the effects of 400 mM ethanol across the first 10 min of exposure shows speed effects beginning in the second minute of exposure but a steady state of effect is not achieved until the seventh minute of ethanol exposure 20. Due to this time-dependent effect on locomotion speed, the order in which particular strains are placed on the plate will be important for any speed measurements prior to the eighth or ninth minute (assuming it takes less than 2 min to place all of the worms on the ethanol plate). At these earlier time points some worms will be more affected by ethanol simply because they were placed on the plate earlier. Even though a stable initial effect of ethanol is achieved by the seventh minute, it is recommended that the order in which strains are placed on plates be varied across replicate trials to minimize any systematic effect across strains due to this time-dependent effect of ethanol and the time required to move worms to the plate.
Specific parameters were chosen in the object tracking steps to minimize bias from worms that repeatedly collide with the copper ring or with other worms. The object size filter step should eliminate any object from tracking that is larger than a single worm, including two touching worms. If a worm touches another worm or the copper ring then the track ends and it should no longer be recognized as a valid object while it remains in contact. When the worm loses contact with the other object, it becomes a new object and initiates a new track. If the track made by a worm is less than 20 sec in length, then it is automatically excluded by defining a minimum track length of 21 frames. This filter prevents instances of a worm moving forward into another object (worm or ring), reversing and then going forward to touch that object again, as short bouts of quick reversals may bias the overall average speed of the population of animals. Using these settings, it is possible and not uncommon for a single worm to contribute more than one track that is greater than 20 sec in length (but less than 99 sec) to the overall average. The settings could be altered so that each worm only contributes a single track by making the minimum track length 61 sec (out of a total of 120 sec), but empirical observation determined that this eliminated a significant number of tracks and it was found that slower worms that collided with other worms less frequently would be over-represented. Alternatively, new tracks could be disallowed to begin after the first frame of the movie but then worms that collide early in the 2-min period are removed from the analysis and useful data would be lost. Finally, the use of 10 worms per copper ring represents a good compromise between having multiple representative tracks contributing to an average and the problem of too many worm collisions.
This behavioral assay has several important advantages for the study of ethanol response behaviors in worms. Simultaneous testing of several genotypes on the same plate is possible through the use of copper “corrals.” This innovation has several distinct advantages. First, in this assay, the control condition or strain is always tested on the same plate at the same time as the experimental condition or strain, and only animals tested simultaneously are directly compared. This is of particular importance because behavioral assays are often influenced by the environment, and day-to-day variation in behavioral responses can increase the noise in the assay and decrease the ability to detect signals. The side-by-side comparison of experimental groups in identical conditions substantially decreases the impact of day-to-day environmental variation, which is a major advantage of this approach. Second, the use of copper corrals contains animals in the field of view, which allows the locomotion assays to be performed in the absence of food. When deprived of food, worms move quickly and tend to disperse in search of bacteria; without the rings, worms would leave the field of view during the course of the assay. In addition, the worms are repelled by copper and tend to stay closer to the middle of the rings, making them easy to visualize. The fact that the worms move quickly in these assay conditions substantially increases the resolution to detect depressive effects of ethanol; when worms move slowly, the speeds reach the floor of the ability to detect them earlier. Note that copper is toxic to the worms; while the rings do not appear to affect the acute responses to ethanol assayed in this protocol, extended incubation of animals in the rings (over several hours) is not recommended. Third, with this experimental design, a single assay can assess the behavioral responses of up to four different experimental groups. Therefore, the time taken to accumulate statistically meaningful data is decreased. In addition, since a single digital movie is made, this decreases memory space requirements for long-term storage of primary data. Finally, in each experiment, the behavior of 10 individual animals of each experimental group is examined. The speeds of those 10 individuals are averaged to generate a composite speed for a single assay, so that n = 1 trial. This averaging of the behavior of many animals further decreases variability in these sensitive behavioral assays, and further increases the resolution to detect subtle effects on ethanol response behaviors.
There are limitations to the methods described here, some of which apply to behavioral analyses of any mutant animals. One significant limitation to this approach is that mutant worms that have very significantly reduced basal speeds, due to incoordination or near paralysis, may be identified as falsely positive for resistance to the effects of ethanol because their measured speed decreases to a value that is below the threshold of accurate detection for a particular imaging setup. As most object tracking software programs use a centroid (center of mass) as the position from which to measure distance traveled between frames, a stationary worm that moves its head can still generate a shift in the position of the centroid and that shift would be detected as movement. Therefore a worm needs to be moving faster than is caused by subtle shifts in body posture in order to measure as true locomotion. Worms exposed to ethanol are not paralyzed but they are very uncoordinated, so with worms that already have a deficit in locomotion it is possible that ethanol exposure will decrease their rates of speed below this technical floor effect. Increasing the time between frames so that larger changes in body position would be separable from subtle shifts in centroid position does not solve this problem, if the time between frames is lengthened much more than 1 sec it becomes more difficult for object tracking software to ensure that the same worm is contributing to a track rather than a track jumping between close but not touching worms.
The authors have nothing to disclose.
These studies were supported by grants from the National Institutes of Health, National Institute for Alcoholism and Alcohol Abuse: R01AA016837 (JCB) and P20AA017828 (AGD and JCB).
C. elegans strains | Caenorhabditis Genetics Center | ||
60 x15 mm Petri plates, triple vented | Greiner Bio-One | 628161 | Other plate brands will suffice. |
NGM agar | Various | NaCl (3g/L), agar (17g/L), peptone (2.5g/L), 1 mL cholesterol (5mg/mL in ethanol), 1 mL (1M) MgSO4, 1 mL (1M) CaCl2, 25 mL (1M) KPO4, pH=6, 975 mL H2O | |
Forceps | Various | e.g. Fisher Scientific #10300 | |
37°C Incubator | Various | For drying agar | |
Digital balance | Various | For determining plate weights and agar volume | |
Copper rings | Plumbmaster | STK#35583 (48 cap thread gasket) | 1.6 cm inner diameter, 1.8 cm outer diameter copper rings |
100% ethanol | Various | ||
Parafilm M | Bemis | PM996 | |
CCD camera | QImaging | RET-4000R-F-M-12 | This camera has a large field of view. |
Stereomicroscope with C-mount and 0.5X objective | Leica | MZ6 | Discontinued model, M60 is current equivalent. |
Light source | Schott | A08923 | 3”x3” backlight for even illumination across the field of view |
Imaging and tracking software | Media Cybernetics | ImagePro-Plus v6.0-6.3 | Newer versions of the software have tracking functions. |