Here, we present a protocol for isolating gonadal tissue of larval zebrafish, which will facilitate investigations of zebrafish sex differentiation and maintenance.
Although wild zebrafish possess a ZZ/ZW sex-determination system, domesticated zebrafish have lost the sex chromosome. They utilize a polygenic sex determination system, where several genes distributed throughout the genome collectively determine the sex identities of individual fish. Currently, the genes involved in regulating gonad development and how they work remain elusive. Normally, isolating gonadal tissue is the first step to examine the sex developmental processes. Here, we present a procedure to isolate gonadal tissue from 17 dpf (days post fertilization) and 25 dpf zebrafish larvae. The isolated gonadal tissue may be subsequently examined by morphology and gene expression profiling.
The major female sex determinant in wild zebrafish chromosome 4 is lost or modified in the domesticated zebrafish (i.e. common lab strains)1. Instead, they have a polygenic sex determination system accompanied by environmental factors such as temperature, hypoxia, food availability and population density. The detailed mechanisms of zebrafish sex development are not fully understood. Fundamental questions such as when zebrafish sex determination occurs, what the primary sex determination signal(s) is/are, and which genes regulate the first step of gonad transformation remain to be answered2,3.
In the process of zebrafish sex development, several important stages have been recognized. In the early stage of development, starting from 4 hpf (hours post fertilization) primordial germ-cells (PGCs) undergo specification, migration to genital ridge and proliferation. PGC numbers and reciprocal interactions between germ cells and somatic cells are important for gonad differentiation4. At 13 dpf (days post fertilization), the gonads are in the undifferentiated stage. By 17 dpf, the gonads develop into bi-potential ovaries in both future females and males. The apoptosis-dependent transition from ovary to testis begin at 21 to 25 dpf and may continue for several weeks. By 35 dpf, the sex of the gonad has been determined and sex-specific gamete production is underway in both ovaries and testes5,6,7.
To date, diverse candidate genes and mechanisms of sex determination have been proposed. Proteomics and transcriptomic analysis have isolated many genes with sexually dimorphic expression and these genes have been utilized to study sex differentiation in zebrafish8,9,10. For example, in larval zebrafish, the cyp19a1a gene is specifically expressed in the ovary but not in the testis11,12. In addition, amh gene is weakly expressed in the ovarian follicle granulosa cells, but strongly in testis Sertoli cells13. In contrast, vasa gene is continuously expressed in the germ cells of both female and male zebrafish, making it a suitable gonad marker14,15.
Investigating gonadal gene expression levels is critical to understand the molecular mechanism of sex determination and differentiation especially in the bi-potential ovary stage3,9. However, the small size of larval zebrafish and correspondingly small gonads complicate the isolation of gonadal tissue for further molecular analysis. Previous studies used dissected whole trunk region between the opercula and anal pore16. This preparation, although containing gonads, consists of multiple tissues and organs. Alternatively, transgenic animals with gonad-specific GFP expression such as vasa: EGFP were used for gonadal tissue isolation via fluorescence activated cell sorting (FACS) and laser capture micro-dissection17,18. But their widespread application is limited. Here, we describe a simple procedure to isolate gonadal tissue from larval zebrafish at 17 dpf and 25 dpf. We demonstrate the position of the gonads with respect to other organs and isolate the morphologically intact gonads from the surrounding tissues. We further show the gonad-specific genes such as vasa and cyp19a1a are highly expressed in the isolated gonads compared with the trunk tissue through quantitative PCR (qPCR) analysis. The present protocol allows identification, isolation, RNA purification and amplification of gonadal specific genes from larval zebrafish, thereby enabling subsequent molecular analysis of gonadal tissue19.
Zebrafish experiments were approved by the Fudan University Institutional Animal Care and Use Committee. Zebrafish were raised and bred according to standard procedures20.
1. Preparations
2. Protocol 1: Dissect the Gonadal Tissue of 17 and 25 dpf Larvae
3. Protocol 2: Analyze Gene Expression of the Isolated Gonadal Tissues
Dissections of the gonads were performed on AB strain larval zebrafish. Figure 1 shows typical gonadal tissue of larval zebrafish at 17 dpf and 25 dpf. Firstly, the skin and muscles of one side of the abdomen is cut to expose the internal organs. After removing the mass of internal organs, the swim bladder together with the gonad remain in the trunk. The gonad was attached to the ventral side of swim bladder (arrow in Figure 1B'). At 17 dpf, the gonad was in the bi-potential ovary stage. The isolated gonad contained the left and the right gonad and was translucent (Figure 1C). In most cases, it was surrounded by epithelial tissue and protonephridium (arrow in Figure 1C). At 25 dpf the gonad was often wrapped by adipose tissues (Figure 1D). At this development stage, either big or small gonad may be observed. The immature ovary is big as the development of the secondary oocytes, and follicle cells increase the gonad volume (Figure 1E). The immature testis is small because of degeneration and apoptosis of the larval ovary (Figure 1F).
To analyze the molecular properties of the isolated gonadal tissues, we first examined gene expression levels of amh, cyp19a1a, nanos3 and vasa, four gonad markers in zebrafish, by qPCR. Total RNA was extracted from larval gonadal tissues (n = 35) using a RNA isolation kit. In addition, we removed the head and tail of 17 dpf larva, and used the trunk tissue (between the structure of the heart and anal pore) to extract RNA as the control group (n = 15). The trunk tissue included skin, muscle, bone (vertebrae and ribs), swim bladder, kidney and gonad. Oligo dT-primed cDNA was used for qPCR. The qPCR result showed increases in amh, cyp19a1a, nanos3 and vasa expression levels in 17 dpf isolated gonadal tissue by approximately 397, 342, 45 and 170-fold, respectively (Figure 2).
Figure 1. Microphotographs of Typical Gonadal Tissues in Larval Zebrafish at 17 dpf and 25 dpf. (A) Rip the skin and muscles of one side of the abdomen to expose the internal organs under a 25X stereo microscope. (B) After removing the mass of internal organs, the swim bladder and the gonad remain attached to the trunk. (B') Amplified view of the red box in panel B to show the relative position of the swim bladder and the gonad. The gonad is indicated by the arrow. (C) Isolated gonadal tissue at 17 dpf. The black tissues in the picture (arrows) are the endothelial tissue and protonephridium attached to gonad. (D-E) A big gonad before and after adipose tissue removal at 25 dpf. (F) A small gonad at 25 dpf. Scale bars: 200 µm. Please click here to view a larger version of this figure.
Figure 2. Normalized Gene Expression Levels of amh, cyp19ala, nanos3 and vasa in the Trunks and Isolated Gonads at 17 dpf. Numbers of animals used: control group, n = 15; gonad group, n = 35. The trunk tissues in the control group are without the head and the tail structures. Gonad group refers to the isolated gonadal tissues. Please click here to view a larger version of this figure.
The zebrafish has become a powerful model and is extensively used in development and disease-related research. The methods for isolation of organs in adult zebrafish such as brain, heart, gonad, and kidney, have been well documented23,24,25. Due to the small size and dynamic remodeling of the gonadal tissues in the larval zebrafish, isolation of gonadal tissue is a challenging task. Previous studies used whole dissected trunk tissues or transgenic vasa: EGFP based cell sorting and laser microdissection to examine the larval gonads26. The modifications of chromosome 4 during domestication makes the sex determination a mystery in the domesticated zebrafish. Our method described here can provide relatively clean and early gonad preparations for further morphological and molecular examinations, which can be helpful to explore the sex-determining mechanisms.
It is not easy to separate the developing gonad from other structures at early the development stages. Our method describes how to perform the dissection. To successfully perform this protocol, some critical steps need to be noted. First, the growth condition of larval zebrafish is critical to yield expected results. The gonadal development of larval zebrafish is a highly dynamic process. The size and appearance of gonadal tissues are determined by the development stages of the animals27. It is important to maintain different batches of zebrafish in standardized condition. The factors that may influence the growth of larvae include population density, duration of light and dark cycles, food availability and feeding schedules. The standard length measurement of larval fish can be used as a guide to determine the growth status of the animals22. A second critical factor for successful gonadal tissue isolation is a good understanding of the relative position and morphological differences between the gonads and the surrounding tissues. Because the gonad is located to the ventral side of the swim bladder, it is convenient to initially isolate the gonads together with the swim bladder. In addition, the distal end of the gonads is tightly attached to the distal end of gut. So one has to be careful when removing the gut from the gonad at the distal ends. For subsequent gene expression analysis, it is essential to use pre-chilled media and agar plate, and perform the whole procedure quickly.
A similar method has successfully been utilized by R.F. Ketting et al.28. They applied the gonad isolation method for investigating the function of piRNAs and the PIWI pathway in 3-week-old larvae. Here, we dissected gonadal tissue from zebrafish larvae as early as 17 dpf to explore the molecular identity and gene expression profile of the developing zebrafish gonad. Future molecular analyses of the earlier isolated gonadal tissue may be performed to determine the transcriptome, methylome and histone acetylation patterns to elucidate the mechanisms underlying sex development in the zebrafish.
The authors have nothing to disclose.
We thank C Zhang for fish care. This work was supported by the National Natural Science Foundation of China (31171074, 31371099 and 31571067 to GP) and by the Pujiang Talent Project (09PJ1401900 to GP).
Cell culture dish 100 mm | Corning | 430167 | For embryo incubation |
20 X EM | For a 1 liter needed: add 17.5 g NaCl, 0.75 g KCl and 2.9 g CaCl.2H2O; then add 0.41 g KH2PO4, 0.412 g Na2HPO4 anhydrous and 4.9 g MgSO4. 7H2O. | ||
1 X EM | Dilute 20 X EM in distilled water | ||
AGAROSE G-10 | Gene | 121985 | For preparing the 2% agar plates |
Trizol Reagent | Invitrogen | 15596-026 | For RNA isolation |
Meter glass | Shen Bo | 250 ml | For preparing the 2% agar plates |
Microwave Oven | Midea | M1-211A | For heating the AGAR |
TWEEZER DUMONT#5INOX | World Precision Instrument | 500341 | For dissection |
Stereomicroscope | Motic | SMZ168 | For dissection |
Pure water equipment | Millipore | ||
Ringer’s solution | For a 1 liter needed: Add 6.78g NaCl, 0.22 g KCl, 0.26 g CaCl2 and 1.19 g Hepes; then fill to 1 L; Adjust pH to 7.2. Sterilize by filtration and keep in an autoclaved clear polycarbonate container. | ||
Transfer pipette | Samco | 202, 204 | |
Metal bath | QiLinbeier | Model GL-150 | |
Microscope | Leica | M205 FA | For photomicrograph |
Centrifuge | Eppendorf | 5417R | |
Micro Scale RNA Isolation Kit | Ambion | AM1931 | For RNA isolation from gonad tissues |
Dnase I | Sigma | AMPD1-1KT | For DNA digestion in the RNA solution |
RevertAid First Strand cDNA Synthesis Kit | Thermo Scientific | #K1631 | For first-strand cDNA synthesis |
Rnase H | Thermo Scientific | #EN0202 | For digesting the residual RNA in the cDNA solution. |
SYBR Green Realtime PCR Master Mix | TOYOBO | QPK-201 | This product is a Taq DNA polymerase-based 2 x master mix for real-time PCR and applicable for intercalation assay with SYBR Green I. |
Spectrophotometer | Ne Drop | OD-2000+ | Measuring the concentration of the total RNA |
Mastercycler | Eppendorf | AG 22331 Hamburg | gene expression profiling |