In this video, we demonstrate a procedure for combined Alcian blue and silver staining of sulfated glycosaminoglycan oligosaccharide fragments. This combined staining technique significantly amplifies the bands of glycosaminoglycan polymers of different lengths in polyacrylamide gels.
Protocol
1. Silver staining protocol Prepare all solutions necessary for silver staining in advance (Table 1). NOTE: Do not directly touch the PAGE gel until it has been stained, developed, and placed in stop solution. Instead, manipulate the gel using clean plastic or glass tools. Directly handling the gel will result in finger-print distortions and other visible artifacts on the gel after staining. Once th…
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The authors have nothing to disclose.
Materials
Alcian Blue 8GX (solid)
ThermoFisher Scientific
AC400460100
Ammonium hydroxide (liquid)
ThermoFisher Scientific
A669S-500
Certified ACS
Barnstead GenPure Pro Water Purification System
ThermoFisher Scientific
10-451-217PKG
Any water deionizing/ purification system is an acceptable substitute
Glacial acetic acid (liquid)
ThermoFisher Scientific
A35-500
Certified ACS
Methanol (liquid)
ThermoFisher Scientific
A412-500
Certified ACS
Silver nitrate (solid)
ThermoFisher Scientific
S181-25
Certified ACS
Sodium hydroxide (solid)
ThermoFisher Scientific
S392-212
Vacuum filter unit, single use, 0.22uM pore PES, 500mL volume
ThermoFisher Scientific
569-0020
Alternative volumes and filter materials acceptable
Molecular Imager Gel Doc XR System
Bio-Rad
170-8170
Any comparable gel imaging system is an acceptable substitute
Silver Staining of Sulfated Glycosaminoglycans: A Staining Method for Visualization of Sulfated Glycosaminoglycans in Polyacrylamide Gels. J. Vis. Exp. (Pending Publication), e21049, doi: (2023).