Gilupi Release Buffer |
Gilupi |
GIL083 |
Used to detach cells from the wire |
McCoy's 5A Medium (1x) suppl. with L-Glutamine |
Thermo Fisher Scientific |
16600-082 |
Culture medium used for HT-29 cells, adapt culture medium to cell line used for the experiments |
HEPES Buffer Solution (1 M) |
PAA |
S11-001 |
Supplement for McCoy's 5A Medium |
Foetal Bovine Serum Gold |
PAA |
A15-151 |
Supplement for McCoy's 5a Modified Medium |
Penicillin-Streptomycin (100x) |
Biowest |
L0018-100 |
Supplement for McCoy's 5a Modified Medium |
Phosphate Buffered Saline (1x PBS) |
Thermo Fisher Scientific |
10010-015 |
|
Accutase |
Biowest |
L0950-100 |
Cell detachment solution (cell culture) |
Water bath |
GFL |
Type 1003 |
Used for prewarming solutions |
Incubator |
Thermo Fisher Scientific |
|
Used to incubate cells (cell culture) |
50 mL reaction tubes |
VWR |
525-0403 |
|
Roller mixer |
Stuart Scientific |
SRT6D |
Used to attach cells to the wire while keeping the cells from sedimenting |
CellTrace CFSE Cell Proliferation Kit |
Thermo Fisher Scientific |
C34554 |
Used to label living cells (cytoplasmic label) |
Hoechst 33342 |
H3570 |
Thermo Fisher Scientific |
Used to stain DNA (nucleic counterstain) |
Centrifuge (equipped for holding 15 mL and 50 mL reaction tubes) |
Thermo Fisher Scientific |
Heraeus Megafuge 40R |
Used for pelleting cells |
Observer Z1 (Fluorescence/laser microdissection microscope) |
Carl Zeiss Microimaging |
|
Inverted (immunofluorescence) microscope capable of laser microdissection; Fluorescence microscopes must be able to detect Hoechst 33342 (DAPI filter) and CFSE (FITC filter) |
Bovine Serum Albumin (BSA) |
Sigma-Aldrich |
A4503-50G |
Used for coating glass/plastic surfaces |
MS1 Minishaker |
Sigma-Aldrich |
Z404039 |
Used for vortexing |
Vacutainer EDTA (or Na-heparin) tubes |
BD |
366450 (or 366480) |
Used as reaction tube for ex vivo capture of target cells |
Detektor CANCER03 DC03 |
Gilupi |
GIL003 |
Functionalized wire capable of isolating and detaching EpCAM-positive cells (also referred to as catch&release, C&R) |
Syringe needles (G20) |
VWR |
613-0554 |
Used to puncture rubber caps in order to allow the non-functional part of the C&R to lead through it |
Neubauer chamber |
Roth |
T729.1 |
Used to count cells |
Pasteur pipettes 150 mm |
Volac |
D810 |
Used for the low-volume application of cells to the C&R |
Grease pen |
Dako |
S2002 |
Used on glass slides to hold cell suspension in place |
Sterile syringe filter (0.2 µm) |
Corning |
431219 |
For filtering freshly prepared Gilupi Release Buffer |
Delfia PlateShaker |
Perkin Elmer |
1296-003 |
Used for agitation during cell detachment |
1.5 mL tubes |
Eppendorf |
30,125,150 |
|
Ampli1 WGA Kit |
Silicon Biosystems |
|
To be ordered via Silicon Biosystems |
Axiovert M200 equipped with Mikromanipulator MMJ and CellTram vario |
Zeiss/Eppendorf |
|
Use micromanipulation at hand |
Microcapillaries (25 µm in diameter), CustomTip Type I |
Eppendorf |
930001201 |
Used for micromanipulating cells |
0.2 mL PCR tubes |
Biozym |
710920 |
|
Cytocentrifuge and equippment |
Hettich |
Universal 32 |
Use cytocentrifuge at hand |
Thermo cycler |
Bio-Rad |
DNA Engine Dyad |
Every thermo cycler with heated lid can be used |
Microcentrifuge |
Roth |
CX73.1 |
Use desk-top centrifuge at hand |
MembraneSlide 1.0 PET |
Zeiss |
415101-4401-050 |
Membrane-coated glass slides used for laser microdissection |