Summary

半高通量筛选潜在的抗干旱的生菜(<em>莴苣</em>)种质资源

Published: April 17, 2015
doi:

Summary

This protocol was developed to screen a large germplasm collection of the leafy vegetable lettuce (Lactuca sativa L.) for drought-tolerance, in order to identify a small candidate pool of lettuce for use in physiological, molecular, and genetic studies to identify underlying drought-tolerance traits along with breeding programs.

Abstract

This protocol describes a method by which a large collection of the leafy green vegetable lettuce (Lactuca sativa L.) germplasm was screened for likely drought-tolerance traits. Fresh water availability for agricultural use is a growing concern across the United States as well as many regions of the world. Short-term drought events along with regulatory intervention in the regulation of water availability coupled with the looming threat of long-term climate shifts that may lead to reduced precipitation in many important agricultural regions has increased the need to hasten the development of crops adapted for improved water use efficiency in order to maintain or expand production in the coming years. This protocol is not meant as a step-by-step guide to identifying at either the physiological or molecular level drought-tolerance traits in lettuce, but rather is a method developed and refined through the screening of thousands of different lettuce varieties. The nature of this screen is based in part on the streamlined measurements focusing on only three water-stress indicators: leaf relative water content, wilt, and differential plant growth following drought-stress. The purpose of rapidly screening a large germplasm collection is to narrow the candidate pool to a point in which more intensive physiological, molecular, and genetic methods can be applied to identify specific drought-tolerant traits in either the lab or field. Candidates can also be directly incorporated into breeding programs as a source of drought-tolerance traits.

Introduction

Water availability for irrigation has been a concern across much of the United States and globally for decades, but research into the response to drought-stress, along with other abiotic stresses, has lagged behind work in the areas of disease and insect resistance, at the industrial, academic, and governmental levels largely due to a lack of funding. Water availability for agriculture has historically been only an afterthought at the level of policy makers. Recently, due to several severe droughts in important agricultural production regions in both the United States and Australia1,2 fresh water availability has been thrust into the spotlight at both the national and international levels leading to many more resources being directed towards research into developing drought-tolerant cultivars of the major grain crops. While this shifting focus toward the development of drought-tolerant major crops is beneficial, like many areas of plant research specialty crops have largely been left behind.

A severe drought is currently limiting vegetable production in California, the largest production region for Lettuce (Lactuca sativa L.) in the United States3. These short-term weather patterns coupled with legislative and judicial action along with long-term climate change4,5 have combined to reduce water available for agriculture in many of the most productive regions of California. Lettuce production in California represents a 1.5 billion dollar industry accounting for nearly 80% of lettuce production in the United States3. Leafy vegetables have high leaf water content and lettuce, in particular, has a shallow root system6,7 which leaves the crop vulnerable to water-stress. In lettuce, as in all crops the development of drought-tolerant varieties will become increasingly important as fresh water supplies for irrigation become more constrained8.

This protocol lays out a method by which an initial screen was performed on a large collection of lettuce germplasm in order to identify a pool of potentially drought-tolerant candidate lines for use in physiological, molecular, and genetic studies to identify specific drought-tolerance traits. These candidates can also be used directly as sources of drought-tolerance in breeding programs to improve water use efficiency in commercial cultivars. This protocol was developed specifically to address the challenges that arise during the course of any screen of an extensive germplasm collection, especially issues of space availability and labor. Also, the protocol as presented was developed for use in lettuce, but has been successfully adapted for use in the screening of a germplasm collection of spinach (Spinacia oleracea) for potential drought-tolerance and could be modified simply to screen any leafy vegetable crop.

An important consideration before initiating a drought-tolerance screen is to understand what this method is and is not. This protocol is meant to represent a rapid method by which a large germplasm pool can be quickly and efficiently narrowed to a manageable number of candidate germplasm for use in more focused and thorough studies to identify individual tolerance traits. This protocol subjects the plants to a rapidly induced severe water-stress in contrast to a more natural slowly-induced moderate continuous drought-stress that would be observed under field conditions. The type of response induced within the plant during these two types of water-stress events (rapid dehydration versus natural drought) is not identical9 which could lead to the exclusion of some materials from future trials. These two stress events are not without overlap though10 and this protocol should serve as an effective way to identify potentially drought-tolerant germplasm contained within a large collection. This protocol alone should not be considered sufficient to identify with a high degree of certainty germplasm that contains durable drought-tolerance under field water-stress conditions, but it represents a significant step forward in the rapid screening of leafy green vegetables for potential drought-tolerance traits.

Protocol

1.种植填写穴盘(128细胞; 28×54厘米与细胞3厘米见方的5厘米深)带插头的土壤结构。为了帮助细胞均匀填充使用空穴盘压缩土壤中的每个托盘。 植物种子生菜¼英寸深入每个细胞2-3种子。工厂所有的实验线的复制盘,以提供一个干旱强调和控制托盘干旱试验。 将穴盘成无孔基盘。 水盘和盖倒托盘或塑料圆顶。发芽通常发生在48〜72小时。发芽后取下盖子和移动托盘到?…

Representative Results

当为了由所希望的实验性状偏析人口,在该协议干旱应激反应的情况下,执行一个大屏幕,生成将相应地从非常不同的数据强调易受可能耐旱和之间的所有点。 图1包含表示结果,可以从这个协议来预期的类型图。三种不同类型的莴苣(莴苣(COS),crisphead和butterhead)代表品种都包含在显示的数据。而代表只有三个生菜类型的数据都在这里显示这个协议是成千上万的莴苣和菠菜种质?…

Discussion

样本数量的考虑屏幕。

所需样品的数量应根据数据从该屏幕的期望用途。如果出版物质量结果所需的建议收获来自每个线路3的个体植物(3次生物学重复),并执行一个最少的2次重复实验,得到足够的点质量的统计分析。如果期望的结果是简单地快速缩小候选种质的大池,以便执行更严格的或复杂的水胁迫实验,更少的样品和或重复可能是必要的。所需样品的?…

Declarações

The authors have nothing to disclose.

Acknowledgements

The authors would like to thank California Department of Food and Agriculture for funding of the project which led to the development of this protocol. CDFA SCB11019.

Materials

Name of Material/ equipment Manufacturer Catalog number Comments
plug tray 128 T.O. Plastics
Hummert International
11-8595-1 Any brand plug tray will work, but use the same style of trays for all trials.
lower tray (Display tray) T.O. Plastics
Hummert International
11-3305-1
plug/planting mix (Sunshine Mix #5) Sunshine
Hummert International
10-0467-1 A different mix may need to be substituted if adapting this protocol to a different crop.  Sunshine mix #4 was used in spinach trials.
fertilizer (20-20-20) Jack's: Professional water-soluble fertilizer
Hummert International
07-5915-1 Any fertilizer can be used, adjust type as needed for adapting this protocol to specific crop needs.

Referências

  1. Dijk, A. I. J. M., et al. The Millennium Drought in southeast Australia (2001–2009): Natural and human causes and implications for water resources, ecosystems, economy, and society. Water Resour. Res. 49, (2013).
  2. Aghakouchak, A., Feldman, D., Stewardson, M. J., Saphores, J., Grant, S., Sanders, B. Australia’s Drought: Lessons for California. Science. 343, 1430 (2014).
  3. Tolomeo, V. California Agricultural Statistics 2012 Crop Year. USDA National Agricultural Statistics Service Pacific Regional Office-California. , (2013).
  4. Cavagnaro, T., et al. Climate Change: Challenges and Solutions for California Agricultural Landscapes. White paper CEC-500-2005-189-SF. California Climate Change Center. , (2005).
  5. Lobell, D. B., Gourdji, S. M. The Influence of Climate Change on Global Crop Productivity. Plant Physiol. 160, 1686-1697 (2012).
  6. Jackson, L. E., Stivers, L. J. Root distribution of lettuce under commercial production: implications for crop uptake of nitrogen. Biological Agriculture and Horticulture. 9, 273-293 (1993).
  7. Jackson, L. E. Root architecture in cultivated and wild lettuce (Lactuca spp). Plant. Cell and Environment. 18, 885-897 (1995).
  8. Malcom, S., Marshall, E., Aillery, M., Heisey, P., Livingston, M., Day-Rubenstein, K. Agricultural Adaptation to a Changing Climate: Economic and Environmental Implications Vary by U.S Region. USDA Economic Research Service. Economic Research Report Number. 136, (2012).
  9. Chaves, M. M., Maroco, J. P., Pereira, J. S. Understanding plant responses to drought- from genes to the whole plant. Funct. Plant Biol. 30, 239-264 (2003).
  10. Ingram, J., Bartels, D. The Molecular Basis of Dehydration Tolerance in Plants. Annu. Rev. Plant Physiol. Plant Mol. Biol. 47, 377-403 (1996).
  11. Weatherley, P. E. Studies in the water relations of the cotton plant. I. The field measurement of water deficits in leaves. New Phlytol. 49, 81-97 (1950).
  12. Smart, R. E., Bingham, G. E. Rapid Estimates of Relative Water Content. Plant Physiol. 53, 258-260 (1974).

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Knepper, C., Mou, B. Semi-High Throughput Screening for Potential Drought-tolerance in Lettuce (Lactuca sativa) Germplasm Collections. J. Vis. Exp. (98), e52492, doi:10.3791/52492 (2015).

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