Low density cultures of primary hippocampal neurons usually require glia feeder layer to supply neurotrophic factors and sustain longevity. We describe here a simplified method to culture ultra-low density neurons on glass coverslips in the presence of a high density neuronal feeder layer, which facilitates investigation of specific neuronal-autonomous mechanisms.
Culturing primary hippocampal neurons in vitro facilitates mechanistic interrogation of many aspects of neuronal development. Dissociated embryonic hippocampal neurons can often grow successfully on glass coverslips at high density under serum-free conditions, but low density cultures typically require a supply of trophic factors by co-culturing them with a glia feeder layer, preparation of which can be time-consuming and laborious. In addition, the presence of glia may confound interpretation of results and preclude studies on neuron-specific mechanisms. Here, a simplified method is presented for ultra-low density (~2,000 neurons/cm2), long-term (>3 months) primary hippocampal neuron culture that is under serum free conditions and without glia cell support. Low density neurons are grown on poly-D-lysine coated coverslips, and flipped on high density neurons grown in a 24-well plate. Instead of using paraffin dots to create a space between the two neuronal layers, the experimenters can simply etch the plastic bottom of the well, on which the high density neurons reside, to create a microspace conducive to low density neuron growth. The co-culture can be easily maintained for >3 months without significant loss of low density neurons, thus facilitating the morphological and physiological study of these neurons. To illustrate this successful culture condition, data are provided to show profuse synapse formation in low density cells after prolonged culture. This co-culture system also facilitates the survival of sparse individual neurons grown in islands of poly-D-lysine substrates and thus the formation of autaptic connections.
Growing hippocampal neurons under in vitro conditions enables observation and experimental manipulation of these neurons that are otherwise not possible in vivo. This experimental approach is widely used to reveal neuronal mechanisms of growth, polarity, neurite specification, trafficking and subcellular localization of proteins, synapse formation and functional maturation1. These in vitro cultured hippocampal neurons, when harvested from late embryonic stages, are relatively pure (>90%) glutamatergic cells of pyramidal morphology2. Because neurons were grown in a 2-D surface under in vitro conditions, this method allows easy observation, such as live imaging or immunocytochemistry (ICC) staining through a single focal plane3; or manipulations, such as drug treatment and transfections3-6. When grown at high density, neurons tend to have high rates of survival because of higher concentrations of secreted growth factors in addition to alimentary support from the growth media, and also because of neurite contact-dependent mechanisms7. However, low density hippocampal neurons are desirable for morphological studies, where an individual neuron can be imaged in its entirety or stained for ICC analysis. Low density neurons are hard to maintain in culture due to lack of paracrine support and thus often require trophic support from a glial (typically cortical astrocyte) feeder layer, which has to be prepared prior to neuron culture2. When co-cultured with a glial cell feeder layer, low density neurons are grown on coverslips, and then flipped on top of the glia layer so that the low density neurons and glia are facing each other. A small confined space between glia and neurons is created by placing paraffin wax dots on the corners of the coverslips, therefore creating a 'sandwich' layout2,8,9. The low density neurons will grow within the confined space between glia and the coverslip, which creates a permissive microenvironment with concentrated factors secreted by neurons and glia. This approach yields low-density, fully developed neurons that are spaced reasonably apart, therefore facilitating ICC labeling or live imaging studies.
An apparent drawback of neuron-glia co-culture, aside from being time-consuming and laborious, is that it prevents study of neuron-specific, or cell-autonomous, mechanisms. Although this system is far less complex than in vivo neural tissue, glia impact on neuron development through secreted, not-yet-fully-defined factors can confound the experiments10. Therefore, in experiments that require the investigation of neuron specific mechanisms, defined culture conditions that remove serum and glial support layer are necessary. A previous study has succeeded in culturing low concentrations of neurons (~9,000 cells/cm2) using a three dimensional hydrogel matrix11. Since a relatively pure neuronal population can be cultured at high density under serum free conditions without glial support, we hypothesize that ultra-low density of hippocampal neurons can be grown in serum free defined culture medium by co-culturing them with high density neurons, in a way that is analogous to the conventionally adopted neuron-glia co-culture. Indeed, high density hippocampal neuron cultures in a 'sandwich' configuration have been recently used to support a small number of specialized magnocellular endocrine neurons12.
Therefore, co-culture with high density neurons may allow low density neurons to receive trophic factors support that is sufficient to enable long term survival. This protocol of culturing ultra-low density neurons was thus formulated and validated. The protocol can be implemented within one single experiment, by preparing high density (~250,000 cells/ml) dissociated hippocampal neurons first, and then making a dilution to yield a density ~10,000 neurons/mL (~3,000 neurons/coverslip, or ~2,000 neurons/cm2), which is much lower than most reported low density cultures2,3,9,11,13. This culture condition is loosely referred to as 'ultra-low density' culture and used with 'low-density' inter-changeably. The high density neurons are plated on the poly-D-lysine coated 24-well plates; while the low density neurons are seeded on poly-D-lysine coated 12-mm glass coverslips that are placed inside another 24-well plate. The coverslips with adhering low density neurons are flipped on top of the high density neurons 2 hr later after the neurons are descended and attached to the coverslips. In addition, instead of using paraffin wax dots to elevate the coverslips above the high density neuron layer, an 18 G syringe needle was used to etch the bottom of the 24 well plates with two parallel stripes. The resulting displaced, adjoining plastics provide an elevated support for the glass coverslips. This space is consistently measured at 150-200 μm, which allows sufficient oxygen and culture medium exchange while providing a microenvironment with concentrated trophic factors. Under this condition, the low density neurons grow extensively, and can survive beyond three months in culture. When these neurons are transfected with GFP plasmid after three weeks in culture, the dendrites are profusely studded with dendritic spines. As a proof of principle, data are presented to show that this co-culture system supports ultra-low density cultures of hippocampal neurons seeded on poly-D-Lysine 'micro-islands', where neurons form autaptic connections that may facilitate investigation of cell-autonomous, network-independent mechanisms.
All experimental procedures involving mice were approved by the Institutional Animal Care and Use Committee of the University of Arizona, and conformed to NIH guidelines.
1. Tissue Source for Hippocampal Neuron Culture
2. 24-well Plates Preparation for High Density Neuron Cultures
Note: Perform the following steps (2-3) the day before the planned harvest of embryos.
3. Coverslips Preparation for Low Density Neuron Cultures
4. Washing and Pre-conditioning Plates for Culture
Note: The following steps (4-9) are carried out on the day of tissue harvest.
5. Preparation of Complete Culture Medium, and Trypsin Solution for Enzymatic Digestion
6. Preparation of Surgical Tools
7. Removal of Brains from E16.5-E17.5 Mouse Embryos, and Dissection of Hippocampi
8. Enzymatic Digestion, Separate into Single Neurons
9. Plating of Neurons and Long Term Co-culture
10. Co-culture Sustaining
11. Illustration of an Experimental Manipulation-low Density Neuron Transfection
Note: When transfection in low density neurons is desired, a simple calcium phosphate protocol can be adopted. We have found that low density cultures have better transfection efficiency with calcium phosphate protocol before DIV12, but they can be transfected with much lower efficiency at DIV21 or older, during which time dendritic spines are prominent. The feasibility of transfection of the cultured low density neuron is illustrated by transfecting neurons with a pEGFP-C3 plasmid (see below).
The protocol described here enables successful ultra-low density, long-term culture of pure glutamatergic neurons without the need of glia cells serving as a feeder layer. The protocol is diagramed in Figure 1, which involves preparation of high density (on poly-D-lysine coated 24 wells) and low-density neurons (on poly-D-lysine coated glass coverslips) separately, and subsequent co-culture that can be maintained up to three months.
Figures 2A and 2B are illustrations of the high density and low density neurons at 5 days after plating. Low density culture is approximately 30 fold less in density. Both neurons undergo typical developmental stages as outlined by Kaech and Banker (2006). At day 14, both high density and low density neurons show elaborate dendritic structures, as revealed by DIC images (Figures 2C, D, note both panels are from the same field with different focal planes, as shown by the location of etch). When these neurons are stained with MAP2 antibody to reveal the dendrites, no significant differences in the number of dendrites (t13= 1.27, p > 0.05; measured by dendritic tip number) and total dendritic length (t16= 1.41, p > 0.05) per neuron between the high density and low density neurons are found (Figure 2E, F).
Immunocytochemistry labeling is used to reveal functional glutamatergic synapses. We use double staining to label the NMDA receptor subunit NR1 and the AMPA receptor subunit GluR1 (Figure 3A), and functional synapses (co-localized puncta in yellow) can be readily identified and quantified using ImageJ. Low density neurons are also labeled with antibody against dendritic protein marker MAP2, in combination with axonal protein marker p-Tau. This double-labeling allows clear distinction of dendrites and axons (Figure 3B). Low density cultures can also be successfully transfected with DNA plasmids using calcium phosphate methods, although the transfection rate is typically very low at later stages (< 0.2% neurons when transfected at DIV21). Figure 3C illustrates that EGFP transfection can reveal neuronal morphology, and render fine dendritic spine structures visible. Lastly, as a proof of concept, ultra-low density neurons can be grown under conditions that promote autapse formation (Figure 3D). These ultra-low density autaptic neurons grown on poly-D-lysine coated 'micro-islands' can be sustained by the high density feeder neuron to beyond 2 months with this co-culture protocol.
Figure 1. Schematic illustration of the high density and low density co-culture protocol. (A) E16.5-E17.5 mouse embryonic brains are collected, hippocampi are dissected out and digested with trypsin. (B) Digested hippocampi are washed, separated into single neurons, and plated at high density (250,000 cells/ml) on 24 well plates; in the meanwhile, low density (10,000 cells/ml) neurons are plated on coverslips. The wells for high density culture are etched with an 18 G syringe needle to provide an elevated support for the coverslips. (C) Illustration of the co-culture. Please click here to view a larger version of this figure.
Figure 2. Both high density and low density neurons have comparable morphological development in co-culture. (A, B) Photomicrographs showing plating density of both high density and low density layer. (C, D) DIC images showing extensive neurite growth in both high (C) and low density (D) neurons. The low density neurons on coverslip are resting right above the high density neurons. Note the location of the raised plastic support. (E) Immunocytochemistry labeling of dendritic protein MAP2. (F) Quantification (mean ± s.e.m) of total dendritic length and dendritic tip number per neuron. No significant difference (n.s.) was seen between high density and low density neurons grown in co-culture. Scale bar in (B, D), 100 μm. Please click here to view a larger version of this figure.
Figure 3. Experimental manipulations of low density neurons grown in co-culture. (A) Immunocytochemistry labeling in low density culture allows identification of functional synapse defined by co-labeling of GluR1 (green) and NR1 (red). (B) Co-labeling of neuronal dendritic protein MAP2 (magenta) and axonal protein p-Tau (green). (C) A low-density hippocampal neuron transfected with pEGFP-C3 plasmid, showing profuse dendritic spines. (D) A low density neuron prepared on poly-D-lysine 'micro-island', and grown on top of the high density neurons. A recording patch electrode fills the neuron with Alexa-555 hydrazide to reveal the morphology of the neuron. Scale bar in A-D, 20 μm. Please click here to view a larger version of this figure.
We present a detailed protocol for long-term culture of ultra-low density hippocampal glutamatergic neurons under serum free conditions. At ~2000 neurons/cm2, the density is at least two fold lower than most 'low density' culture preparations with or without glia support reported by the existing literature2,3,11,13,14. In addition to being ultra-low density, this protocol is novel and significant in two more ways. First, no glia feeder layer is needed as the low density neurons obtain trophic factor support from the high density neurons that are within close physical proximity, even though there are no synaptic connections or direct contact between the neurons cultured at different densities. This protocol eliminates the need for preparing glia monolayer ahead of the planned culture experiments, and allows both high density and low density cultures to grow simultaneously. Preparation of the glia monolayer can be time-consuming and laborious, and most literature uses neonatal rat pup cortices2. Therefore, for labs that work with mice only, this requires significant additional efforts. More importantly, in experiments where neuronal specific mechanisms are investigated, the presence of glia in the co-culture can be undesirable, because it prevents ascribing observed effects specifically to neurons, glia or the interaction between the two cell types10. In addition, for glia culture, serum supplement is obligatory2,15, and this may contaminate the glia-neuron co-culture and introduce additional confounding factors. One important feature of our protocol is that the co-culture is under defined medium conditions. We strictly use the Complete Culture medium without serum supplement, and find that if the culture medium exchange schedule is strictly followed, the co-culture can be sustained beyond three months, which should satisfy the majority of experiments. Because there is virtually no glia presence, one limitation of this technique is that caution should be exercised when comparing with the results of literature that use glia-neuron co-cultures.
Another novel aspect of this protocol is that we use a simple method to create an effective micro-space between the high density neurons grown on the bottom of the 24-well plate, and the low density neuron adhered to the glass coverslips sitting right above. Previous studies uses paraffin dots applied to the coated coverslips to raise the coverslips at ~500 μm above the glia feeder layer2,8,9. Preparation of paraffin dots requires the right size and right temperature, which demands a reasonable amount of efforts and practice. In comparison, a simple etching on the well bottom plastics with an 18 G needle provides support for the coverslips as well as good separation between the two layers of neurons. We have used a patch clamp recording rig with digital Z meter to determine the linear space between the two layer of neurons by focusing on the high density and then on the low density layers using a 60X water immersion objective, and found that the space is typically 150-200 μm (179.4 +/-25.3 μm, n = 5). This narrower space (compared with that generated by wax dots) is likely to translate to a faster rise, and higher concentration of neurotrophic factors, therefore providing sufficient support for the low density neuron to grow. Although this narrower space may raise questions about the rate of culture medium exchange and whether the smaller space impedes neurons from obtaining oxygen and nutritional support, our results show that this is not likely a concern. On the contrary, we found that the high density neurons under the coverslips also grow better (higher survival rate, more elaborate dendritic tree and more synaptic puncta by NR1 staining, data not shown) compared with the high density neurons from the same preparation but without the overlaying coverslips. Therefore, this simple protocol is not only fast, simple, but also very effective in sustaining both high density and low density neurons.
Culturing hippocampal neurons in vitro requires coating of growth promoting substrates, such as poly-D-lysine and/or laminin/collagen5,16. Although meticulous selection and preparation of glass coverslips are critical for effective neuronal survival, we have found that with the cover glass we selected, a thorough cleaning with 70% ethanol is sufficient, thus negating the need of harsher treatment (e.g., boiling in acids) of the coverslips. After the coverslips are cleaned in ethanol and dried by vacuum, the glass seems to be hydrophobic due to the original coating. However, successful coating of 0.1 mg/ml poly-D-lysine in borate buffer should render the glass surface hydrophilic, so that when the coverslips are picked up from the washing water, a uniform layer of water that is evenly spreading across the entire glass surface can be observed. We found that this is critically important. Otherwise the neurons will most likely die after plating due to insufficient coating. Although only low density hippocampal neurons are tested in this protocol, it is expected that other neuronal types (e.g., cortical neurons, cerebellar granule neurons, or specialized neural populations) can also be sustained at low density in the presence of a high density neuron feeder layer. Lastly, when this simple protocol is followed, one can expect to harvest healthy ultra-low density neurons. Broad applications such as immunocytochemistry labeling, live imaging, morphological studies and electrophysiology recording can all be conducted on these neurons following standard procedures16,17.
The authors have nothing to disclose.
This study was supported by an NIH/NIMH grant to S.Q. (R00MH087628).
Neurobasal medium | Life Technologies | 21103-049 | Protect from light |
B27 supplement | Life Technologies | 17504-044 | aliquot, store in 0.6ml size |
GlutaMAX-I | Life Technologies | 35050-061 | dilute 100X |
antibiotic-antimycotic (AA) | Life Technologies | 15240-096 | dilute 100X |
Complete Culture medium | Neurobasal medium with 1X B27, 1X AA, 1X GlutaMAX-I | ||
Wash medium | same as 'Neurobasal medium' | ||
Feed medium | Neurobasal with 1X B27 supplement | ||
DNAse I | Sigma-Aldrich | D5025 | prepare 100X stock at 0.6mg/ml |
poly-D-lysine | Sigma-Aldrich | P6407 | M.W. 70000-150000 |
borate buffer | Sigma-Aldrich | B6768 (boric acid); 71997(borax) | 1.24g boric acid & 1.9g borax in 400ml H2O, pH to 8.5 use HCl |
12-mm round glass coverslips | Glasswarenfabrik Karl Hecht GmbH | 1001/12 | No. 1 glass, purchase from Carolina Biological Supply |
proFection transfection kit | Promega | E1200 | see protocol for details |
2X HEPES buffered saline (HBS) | Promega | E1200 | see protocol for details |
Syringe filter | Pall Corporation | 4192 | 0.2um pore size |
Endofree plasmid prep kit | Qiagen | 12362 | for preparation of transfection grade plasmid DNA |
anti-MAP2 antibody | Millipore | MAB3418 | mouse antibody, clone AP20 |
anti-p-Tau antibody | Millipore | AB10417 | rabbit polyclonal antibody |
anti-NR1 antibody | Millipore | MAB1586 | mouse antibody, clone R1JHL |
anti-GluR1 antibody | Millipore | AB1504 | rabbit polyclonal antibody |
Hank's balanced salt solution | ThermoFisher | 14025092 | 500ml size |