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May 09, 2011
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We present a public computational web site for the analysis of genomic sequences. It detects DNA sequence patterns with various non-random nucleotide compositions. This resource also generates randomized sequences with diverse levels of complexity.
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Genomic MRISequence PatternsNon-coding Genomic RegionsIntergenic AreasIntronsUntranslated SegmentsMid-Range Inhomogeneity (MRI) RegionsNucleotide CompositionBase EnrichmentNon-B-form DNA StructuresGene Expression RegulationRecombinationGenetic ProcessesFixation BiasSequence InhomogeneityComputational AnalysisMRI PatternsRandomized SequencesNatural Input DNA SequencesNon-coding DNA Examination
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Prakash, A., Bechtel, J., Fedorov, A. Genomic MRI - a Public Resource for Studying Sequence Patterns within Genomic DNA. J. Vis. Exp. (51), e2663, doi:10.3791/2663 (2011).
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