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非计算机专业人员使用深度学习对元数据的生物序列进行分类的虚拟计算机平台

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Génétique
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Journal JoVE Génétique

A Virtual Machine Platform for Non-Computer Professionals for Using Deep Learning to Classify Biological Sequences of Metagenomic Data

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非计算机专业人员使用深度学习对元数据的生物序列进行分类的虚拟计算机平台

DOI:

10.3791/62250-v

•

09:34 min

•

September 25, 2021

•

Zhencheng Fang², Hongwei Zhou³

¹Microbiome Medicine Center, Department of Laboratory Medicine, Zhujiang Hospital,Southern Medical University, ²Center for Quantitative Biology,Peking University, ³State Key Laboratory of Organ Failure Research,Southern Medical University

Chapitres

00:07Introduction
01:35The Installation of the Virtual Machine
04:11Create Shared Folders and Prepare the Files for the Training Set and Test Set
06:55Digitize the Biological Sequences Using “One‐Shot” Encoding Form
07:27Train and Test the Artificial Neural Network
08:12Result
08:52Conclusion

Summary

Traduction automatique

本教程描述了构建深度学习算法的简单方法，用于执行计量数据的 2 级序列分类。

Tags

Virtual Machine Deep Learning Biological Sequence Classification Metagenomic Data Species Classification Gene Function Classification Host Classification Deep Learning Framework Sequence Classification VirtualBox Ubuntu

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