Here, we present the fabrication method of an optrode system with optical fibers for light delivery and an electrode array for neural recording. In vivo experiments with transgenic mice expressing channelrhodopsin-2 show the feasibility of the system for simultaneous optogenetic stimulation and electrophysiological recording.
During the last decade, optogenetics has become an essential tool for the investigation of neural signaling due to its unique capability of selective neural modulation or monitoring. As specific types of neuronal cells can be genetically modified to express opsin proteins, optogenetics enables optical stimulation or inhibition of the selected neurons. There have been several technological advances in the optical system for optogenetics. Recently, it was proposed to combine the optical waveguide for light delivery with electrophysiological recording to simultaneously monitor the neural responses to optogenetic stimulation or inhibition. In this study, an implantable optrode array (2×2 optical fibers) was developed with embedded multichannel electrodes.
A light-emitting diode (LED) was employed as a light source, and a microfabricated microlens array was integrated to provide sufficient light power at the tip of the optical fibers. The optrode array system comprises the disposable part and the reusable part. The disposable part has optical fibers and electrodes, while the reusable part has the LED and electronic circuitry for light control and neural signal processing. The novel design of the implantable optrode array system is introduced in the accompanying video in addition to the procedure of the optrode implantation surgery, optogenetic light stimulation, and the electrophysiological neural recording. The results of in vivo experiments successfully showed time-locked neural spikes evoked by the light stimuli from hippocampal excitatory neurons of mice.
Recording and controlling neural activity is essential for understanding how the brain functions in a neural network and at cellular levels. Conventional electrophysiological recording methods include the patch clamp1,2,3,4 using a micropipette and extracellular recording using microneural electrodes5,6,7,8. As a neuromodulation method, electrical stimulation has been frequently used to directly stimulate a focal brain region through direct or indirect depolarization of neuronal cells. However, the electrical method cannot distinguish neuronal cell types for recording or stimulation because the electrical currents spread in all directions.
As an emerging technology, optogenetics has ushered in a new era in understanding how the nervous system works9,10,11,12,13,14,15,16. The essence of optogenetic techniques is to use light to control the activity of light-sensitive opsin proteins expressed by genetically modified cells. Thus, optogenetics enables the sophisticated modulation or monitoring of genetically selected cells in complicated neural circuits14,17. The wider use of the optogenetic approach has necessitated simultaneous neural recording to directly confirm optical neuromodulation. Therefore, an integrated device with light control and recording functions would be extremely valuable16,18,19,20,21,22,23,24,25.
There are limitations of conventional, laser-based optogenetic stimulation, which requires a bulky and expensive light delivery system26,27,28,29,30. Therefore, some research groups employed µLED-based silicon probes to minimize the size of the light delivery system31,32,33,34. However, there is a risk of thermal brain damage caused by direct contact with µLEDs due to the low energy conversion efficiency of LEDs. Light waveguides, such as optical fibers, SU-8, and silicon oxynitride (SiON), have been applied to avoid thermal damage30,35,36,37,38,39. However, this strategy also has a drawback due to its low coupling efficiency between light sources and the waveguides.
The microlens array was previously introduced to enhance the light coupling efficiency between LEDs and optical fibers40. An optrode system was developed based on microelectromechanical systems (MEMS) technologies for optical stimulation and electrical recording on a microscale40. The microlens array between an LED and optical fibers increased the light efficiency by 3.13 dB. As shown in Figure 1, a 2×2 optical fiber array is aligned on the 4×4 microlens array, and the LED is positioned below the microlens array. The 2×2 optical fibers are mounted instead of 4×4 to reduce brain damage. A tungsten electrode array is positioned adjacent to the optrode array using silicon via holes for electrophysiological recording (Figure 1B).
The system consists of a top disposable part and detachable bottom parts. The top disposable part, which includes the optical fiber array, microlens array, and the tungsten electrode array, is designed to be permanently implanted into the brain for in vivo experiments. The bottom part includes an LED light source and an external power supply line, which is easily removable and reusable for another animal experiment. An attachable plastic cover protects the disposable part when the detachable part is removed.
The feasibility of the system is verified by implantation into the brains of transgenic mice expressing channelrhodopsin-2 (ChR2) in Ca2+/calmodulin-dependent protein kinase II-positive neurons (CaMKIIα::ChR2 mouse). Recording electrodes were used to record the neural activities from individual neurons during optical stimulation of the neurons.
The animal care and surgical procedures were approved by the Institutional Animal Care and Use Committee (IACUC) at the Ewha Womans University (no. 20-029).
1. Preparation of an optrode array (Figure 1 and Figure 2)
2. Implantation surgery (Figure 3 and Figure 4)
NOTE: Sterile technique must be followed during surgery.
3. Recovery and implant care
4. Optogenetic stimulation and electrophysiological recording
5. Data analysis
6. Euthanasia
The optrode system is successfully fabricated to provide sufficient light power to activate the target neurons. The fine alignment of the tungsten electrodes is achieved through the microfabricated silicon via the holes. The measured light intensity is 3.6 mW/mm2 at the optical fiber tip when 50 mA current is applied. The microlens increased the light efficiency by 3.13 dB. Due to the microlens array, which enhances the light coupling, the applied current is approximately half of the current required to achieve the same light intensity without the microlens array system. As the LED generates more heat with more current, it is obviously advantageous to employ the microlens array for lowering the heat of the device. The average impedance of 4 electrodes was 71.39 kΩ at 1 kHz frequency, which is low enough for the detection of the action potentials. Furthermore, the optrode array comprises the disposable and reusable parts to reduce the cost and minimize the total weight of implantation. The weight of the disposable part is ~0.58 g.
A CaMKIIα::ChR2 mouse was used to directly stimulate the ChR2-expressing neurons, and the evoked neural spikes were successfully recorded, as shown in Figure 6. We showed the whole recorded waveforms with exact conditions, including 2 s light-on period in the middle (Figure 6A). Spike sorting from the raw data signal was conducted using a custom-made MATLAB source code. The total neural activity was analyzed after sorting out two different units. The number of evoked individual neural spikes following each light stimulation pulse significantly increased compared with the baseline (Figure 6A,B), with different time bins of 2 s and 0.2 s. As a result, we could identify the clear effect of optogenetic stimulation on the neurons.
Figure 1: Schematic diagram of optrode array and microlens array. (A) 3D schematic view and crosssectional view; (B) SEM image of 4X4 microlens array and silicon vias. Scale bar = 1 mm (B). Abbreviation: LED = light-emitting diode. Please click here to view a larger version of this figure.
Figure 2: Device prototype of optrode system. (A) Whole view of the system. (B) Enlarged view of the optrode array. Scale bars = 5 mm (A), 2 mm (B). Please click here to view a larger version of this figure.
Figure 3: Implantation surgery. (A) Skull is exposed and cleaned by removing periosteum. (B) Target brain area was exposed, and ground screw was inserted above cerebellum. (C) Optrode array was inserted into brain to target depth. Ground was connected electrically. (D) Dental cement is applied to fix the device. Please click here to view a larger version of this figure.
Figure 4: Schematic diagram of the administration, operation, and in vivo experiment timeline. Please click here to view a larger version of this figure.
Figure 5: Experimental setup of electrophysiological recording system. (A) LED light off, (B) LED light on. Abbreviation: LED = light-emitting diode. Please click here to view a larger version of this figure.
Figure 6: Electrophysiological recording results. (A) Representative waveforms of neural recording and enlarged waveform in red dashed rectangle indicating two light stimuli (blue bars) and sorted spikes (red and black arrowheads). (B) Spike histogram for each channel before, during, and after light stimulation. Inset figure indicates the location of the implanted optrode array. (C) Spike histogram with 100 ms time bin. Blue bar indicates the period of LED light on. Abbreviation: LED = light-emitting diode. Please click here to view a larger version of this figure.
The feasibility of the system for simultaneous optogenetic stimulation and electrophysiological recording was verified (Figure 6). The big spikes during light stimulation are photoelectric artifacts occurring at the same time as the light stimulation (Figure 6A). This is clear in the zoomed view of the waveform in the red dashed rectangle (Figure 6A). As shown in Figure 6A, the photoelectrical artifacts could be clearly sorted out from the recorded waveforms, and the neuronal responses induced by the optogenetics stimulation of the hippocampal signal pathway were clearly identified. Figure 6B,C indicate the number of spikes, showing the stimulation effect clearly. Figure 6A is one of the waveforms used to obtain the histograms in Figure 6B,C, because the recording results are obtained from 8 repeated recording sessions.
Figure 6A shows the light-induced increase in neural activity. We have conducted the same experiment with control mice without ChR2 expression. In that case, the optogenetic stimulation did not increase the neural activity. As the photoelectrical artifacts are easily excluded from the recording data, the result from the control animal is not included in the manuscript. Furthermore, the differences in the recording results among the 4 channels, as shown in Figure 6, can be justified by considering that the distance between the tungsten recording electrodes is 300 µm (center-to-center). It is likely that the spike activities in different channels are from different neurons. However, because the neuronal cells are connected, especially in the local brain region, the overall patterns of neuronal spiking were similar but not exactly the same.
To ensure the success of these animal experiments, several critical steps require high accuracy and additional attention during the implantation surgery. First, bleeding from the brain blood vessels must be carefully handled. Do not continue to the next steps until the bleeding has completely stopped. This will allow for the firm attachment of the implanted device on the brain and clear visibility during the surgical procedure. Cauterizing the bleeding spots with a bovie, sterilizing with saline, and inserting gel foam can be helpful to stop the bleeding.
Second, the mouse brain must be protected from dryness during the optrode implantation. Saline and gel foam are used to keep moist. If the dura membrane is removed and the brain is entirely exposed, the other surgical steps must be performed as quickly as possible. Third, the slow insertion speed of the optrode is also crucial. Slower insertion reduces tissue damage and improves the accuracy of the implantation into the targeted location46. As the deformation of the brain tissue is inevitable during the optrode insertion, slow insertion is very helpful for the deformed tissue to restore its original shape and volume.
Fourth, the fixation process determines long-term stability. It is helpful to make the skull surface dry before solidifying the dental cement for improved, long-term attachment. In addition, care must be taken to avoid applying too much dental cement or letting the cement stick directly to the skin. As the incised skin regenerates over time, it can gradually push and detach the cement from the skull as the skin grows. Moreover, direct contact of the dental cement with the brain tissue must be avoided because dental cement is harmful to brain tissue. This can be effectively prevented by gel foam insertion between the exposed brain and the device.
Besides the surgical procedures, the optrode system must be carefully checked before starting the experiments. First, the implantable part of the optical fiber array and the electrodes must be examined under a microscope before insertion. It is necessary to check whether there is any breakage in the optical fiber because even a small crack can cause critical light loss. Further, the alignment between the optic fibers and the recording electrodes must be checked for precise insertion. Fine forceps can minutely bend the tungsten electrodes to rectify their misalignment.
Second, the light intensity must be checked before implantation surgery to determine whether the light power is above the threshold and high enough to activate the opsins. In practice, it is known that the excitation threshold for ChR2 is approximately 1 mW/mm2 47. However, light-generated tissue heating must be minimized while providing enough light intensity to excite the neuronal cells. Too strong light energy may damage the brain tissues due to an increase in temperature. A temperature increase of 6-8 °C in the brain can cause immediate and irreversible tissue damage12,48. A previous study showed that the temperature increase at the optical fiber tip is less than 0.5 °C49. A low duty cycle of optical stimulation with a short duration can be helpful. Compared with previous studies reporting temperature issues with optogenetic stimulation, our output power (2 mW/mm2) and the protocol with light stimulation with 4 ms at 20 Hz for 2 seconds is appropriate and within the safe range.
A major challenge for neural recording is to remove the artifacts induced by optical stimulation. Artifacts synchronous with optical stimulation must be considered in several different aspects because both electrical and optical mechanisms can generate these artifacts. First, electrical artifacts can be caused by the electrical circuit driving the LED. When an electrical current flows in a circuit to drive light stimulation, electrical artifacts may be generated. This problem can be overcome by minimizing the number of wires for the LED connections and maximizing the distance between the light stimulation circuit and the wires connected with the tungsten recording electrodes. Second, photoelectric artifacts can be generated by the photoelectrochemical effect during optogenetic stimulation. These artifacts can be minimized by avoiding direct exposure of the recording electrode to the stimulation light and increasing the spacing between the optical fibers and the electrodes. However, it is difficult to eliminate light-induced artifacts due to light scattering in the brain tissue.
There are still limitations in the proposed optrode array, which can be improved in future studies. Although the optic fiber tip was cut flat in this study, beveling or tapering of fiber tips will minimize tissue damage during insertion and increase the angle of light spreading from the tips50. Another limitation is low light intensity. Despite the results of the electrophysiological recording, the proposed system has a relatively lower output power than a laser-based system. Therefore, the proposed LED-based system can optogenetically excite a smaller brain region than the laser-based system. This is mainly because most LEDs have much lower power than lasers in general. However, as the efficiency and the maximum intensity of LEDs have been dramatically improved recently, LEDs with a higher output power can be developed with new semiconductor technologies. The other limitation is that a longitudinal recording study was not performed. However, it was confirmed that the device was well attached to the mice for one month. This result shows the possibility that the device is suitable for long-term experiments. Therefore, long-term in vivo tests will be conducted to verify the stability of the device.
The most typical method for optogenetics in laboratories is to use a laser system as the light source. Although a laser can provide a higher output power than LEDs for activating opsins, the laser-based system cannot be easily miniaturized and requires high-cost implementation. In contrast, the LED-based optogenetic system has several advantages, such as low system complexity, cost-effectiveness, and low power consumption, which are advantageous for the development of the wireless system. Therefore, in this study, the LED is employed as the light source, and the microlens array is adopted to increase the light intensity of the LED.
In addition, the light source and the current driving circuits comprise the detachable and reusable parts of the system. New LEDs with different wavelengths can be easily used in the device by simple replacement, and the system cost can be significantly reduced due to reuse in multiple experiments. The whole system can be implemented further as a wireless system, which optogenetically stimulates and records neuronal signals without tethered lines by adopting a low-power wireless system into the miniaturized integrated device.
The authors have nothing to disclose.
This research was supported by Convergent Technology R&D Program for Human Augmentation through the National Research Foundation of Korea (NRF), funded by the Ministry of Science and ICT (NRF-2019M3C1B8090805), and supported by a National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIT) (no. 2019R1A2C1088909). We thank Seung-Hee Lee's laboratory at the Department of Biological Sciences, KAIST, Daejeon, Korea, for kindly providing the transgenic mice.
5-pin Connector | NW3 | HD127K | 1.27 mm (.050") pitch |
Bovie | Fine Science Tools(F.S.T) | 18010-00 | High Temperature Cautery Kit |
Data Acquisition Software | Intan Technologies, LLC | USB Interface Board software | Work with the RHD USB Interface Board |
Dental Cement | Lang Dental Manufacturing Company, Inc. | 1223CLR | Use Jet Liquid and powder in jet denture repair package |
Digital Manipulator Arm | Stoelting Co. | 51904/51906 | Left, Right each Digital Manipulator Arm, 3-Axes, Add-On |
Gel Foam | Cutanplast | Standard (70*50*10 mm) | Sterile re-absorbable gelatin sponge with a haemostatic effect |
Headstage Preamplifier | Intan Technologies, LLC | #C3314 | RHD 16-Channel Recording Headstages |
Heating Pad | Stoelting Co. | 53800R | Stoelting Rodent Warmer X1 with Rat Heating Pad |
LED | OSLON | GB CS8PM1.13 | λ typ. 470 nm, Viewing angle 80 °, Forward voltage 2.85 V |
MATLAB | MathWorks, Inc. | R2019a | |
Micro Clamp | SURGIWAY | 12-1002-04 | Straight type, Serre-fine DIEFFENBACH droite 3.5 cm |
Optical Fiber | Thorlabs, Inc. | FT200UMT | 0.39 NA, Ø 200 µm Core Multimode Optical Fiber, High OH for 300 – 1200 nm |
PFA-Coated Tungsten Wire | A-M System | Custom ordered | Rod type, Ø 101.6 μm (.004") |
Photodiode | Thorlabs | S121C | |
power meter | Thorlabs Inc. | PM100D | |
Precision cleaver | FITEL | S326 | Fiber slicer tool |
Prism | GraphPad | 5.01 version | |
Scalpel | Feather™ | #20 | Scalpel blade with 100mm long Scalpel Handle |
screw | Nasa Korea | stainless steel | diameter: 1.2 mm, length: 3 mm |
Silver Wire | The Nilaco Corporation | AG-401265 | Ø 200 µm |
Stereotaxic Fxrame | Stoelting Co. | 51500D | Digital new standard stereotaxic, rat and mouse |
suture | ETHICON | W9106 | suture size: 4-0, length:75 cm, wire diameter: 4-0 |
Vaseline | Unilever PLC | Original | 100% pure petroleum jelly |
Wave_Clus | N/A | N/A | https://github.com/csn-le/wave_clus |