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Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
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Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
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Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin

DOI:
10.3791/56684-v

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08:57 min

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August 14, 2018

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, , , , ,
1Key Laboratory of Three Gorges Regional Plant Genetics and Germplasm Enhancement (CTGU)/Biotechnology Research Center,China Three Gorges University, 2The Institute of Bioinformatics, College of Life Sciences,Anhui Normal University, 3Department of Plant Biology,University of Illinois at Urbana-Champaign, 4College of Resources & Environmental Sciences,Nanjing Agricultural University

Chapters

  • 00:04Title
  • 00:44Sequence Alignment
  • 04:23Computation of the Phylogenetic Tree
  • 06:36Presentation of the Phylogenetic Tree
  • 07:35Results: Analysis of the Phylogenetic Tree
  • 08:22Conclusion

Summary

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A method of constructing a phylogenetic tree based on sequence homology of SWEETs from eukaryotes and SemiSWEETs from prokaryotes is described. Phylogenetic analysis is a useful tool for explaining the evolutionary relatedness between homologous proteins or genes from different organism groups.

Tags

Phylogenetic AnalysisEukaryotic Gene OriginSequence AlignmentClustal OmegaSWEET GenesBioEditMEGAMtN3 Saliva DomainProtein SequencesFASTA FormatSequence Trimming

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