Here, we present a protocol to synthesize a complex organic compound comprised of three nonplanar polyaromatic units, assembled easily with reasonable yields.
The main purpose of this video is to show 6 reaction steps of a convergent synthesis and prepare a complex molecule containing up to three nonplanar polyaromatic units, which are two corannulene moieties and a racemic hexahelicene linking them. The compound described in this work is a good host for fullerenes. Several common organic reactions, such as free-radical reactions, C-C coupling or click chemistry, are employed demonstrating the versatility of functionalization that this compound can accept. All of these reactions work for planar aromatic molecules. With subtle modifications, it is possible to achieve similar results for nonplanar polyaromatic compounds.
Due to their special geometry, corannulene and helicenes are molecules that can adopt a structure far from planarity and give rise to interesting properties.1-15 In the last few years, the search of molecular receptors for carbon nanotubes and fullerenes is a very active area16-19 due, mainly, to their potential applications as materials for organic solar cells, transistors, sensors and other devices.20-28 The excellent complementarity in shape between corannulene and a fullerene have attracted the attention of several researchers with the aim of designing molecular receptors capable of establishing supramolecular association by dispersion forces.29-39
The chemistry of the above mentioned nonplanar polyaromatic compounds is similar to that described for totally planar molecules, but it is sometimes difficult to find suitable conditions to achieve desired selectivities and yields.40 In this work we present the synthesis of a molecule (7) having three polyaromatic units in a few steps with good yields by applying easy and typical techniques found in every research laboratory. The molecule is of great importance because it can adopt a pincer-like conformation to establish good interactions with C6037 in solution; and it may open a research line as a potential receptor for higher chiral fullerenes thanks to the helicene linker, which is a chiral molecule due to the existence of a stereogenic axis.41-45 However, only racemic helicene will be used in this work.
At this point, the only limitation to synthesize these receptors is the preparation of helicenes and corannulenes, since they are not commercially available. But, according to new methods published elsewhere46-48 they can be obtained in suitable amounts in a reasonable short period of time.
1. Functionalization of 2,15-Dimethylhexahelicene
Figure 1. 1H-NMR spectra (500 MHz, CDCl3) of 2,15-dimethylhelicene (top) and an aliquot taken after 2 hr. New signals, corresponding to -CH2-, are depicted in a red circle (bottom). Please click here to view a larger version of this figure.
Figure 2: 1H-NMR spectra (500 MHz, CDCl3) of 4b (top) and an aliquot taken after 3 hr (bottom). Note the changes in the aliphatic region. Please click here to view a larger version of this figure.
2. Functionalization of Corannulene
Figure 3: 1H-NMR spectra (500 MHz, CDCl3) of 5a (top) and 6a (bottom). -CCH singlet is depicted in a red circle. Please click here to view a larger version of this figure.
3. Final Assembly by Click Chemistry
Figure 4: 1H-NMR spectra (500 MHz, CDCl3) of 5b (top), 6a (middle) and an aliquot taken after 2 days (bottom). Note the disappearance of -CCH signal in the crude. Please click here to view a larger version of this figure.
Corannulene (3a) and 2,15-dimethylhexahelicene (3b) could be prepared following current methods46-48 in a straightforward fashion with very good yields (Figure 5). Both share a common molecule, 2,7-dimethylnaphthalene, as the starting material, giving rise to a divergent to convergent synthesis of the final molecule.
Figure 5: Schematic route for the preparation of corannulene and 2,15-dimethylhexahelicene. Not covered in this work. For further details, see references. Please click here to view a larger version of this figure.
According to the proposed synthetic route (Figure 6), the final compound was prepared with 6 steps from the molecules mentioned above. 2,15-Dimethylhexahelicene (3b) was monobrominated in each methyl group and subsequently substituted by -N3 groups in order to get the first fragment (5b). On the other hand, corannulene (4a) was functionalized with an alkynyl group through bromination followed by Sonogashira C-C coupling and a final deprotection step. In the last reaction, both fragments were combined with a 1,3-dipolar cycloaddition catalyzed by Cu(I) salt.
Figure 6: Synthesis of corannulene-functionalized hexahelicene (7). Conditions: (a) NBS, BPO, CCl4; (b) NaN3, THF/H2O; (c) NBS, Gold(III) chloride, DCE, MW; (d) Ethynyltrimethylsilane, CuI, [PdCl2(dppf)], NEt3; (e) KF, MeOH/H2O; (f) CuSO4·5H2O, sodium ascorbate, THF/H2O. Please click here to view a larger version of this figure.
1H and 13C{1H}-NMR spectra are given (except for 13C{1H}-NMR spectrum of 6a, due to its high instability) as well as MALDI-TOF HRMS for 7.
Figure 7: 1H-NMR (500 MHz, CDCl3) of 4a. Integration of characteristic protons are labeled. Please click here to view a larger version of this figure.
Figure 8: 13C{1H}-NMR (125 MHz, CDCl3) of 4a. Only the spectral window corresponding to characteristic carbons is shown. Please click here to view a larger version of this figure.
Figure 9: 1H-NMR (500 MHz, CDCl3) of 5a. Integration of characteristic protons are labeled. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 10: 13C{1H}-NMR (125 MHz, CDCl3) of 5a. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 11: 1H-NMR (500 MHz, CDCl3) of 6a. Integration of characteristic protons are labeled. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 12: 1H-NMR (500 MHz, CDCl3) of 4b. Integration of characteristic protons are labeled. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 13: 13C{1H}-NMR (100 MHz, CDCl3) of 4b. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 14: 1H-NMR (500 MHz, CDCl3) of 5b. Integration of characteristic protons are labeled. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 15: 13C{1H}-NMR (100 MHz, CDCl3) of 5b. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 16: 1H-NMR (500 MHz, CDCl3) of 7. Integration of characteristic protons are labeled. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 17: 13C{1H}-NMR (100 MHz, CDCl3) of 7. Inset: zoom of aromatic region. Please click here to view a larger version of this figure.
Figure 18: HRMS MALDI-TOF of compound 7. The isotopic pattern corresponds to [M+H]+ ion of formula C72H39N6 at m/z 987.3233 (predicted m/z is 987.3231). Please click here to view a larger version of this figure.
Final compound 7 has been prepared after 6 steps from nonplanar polyaromatic precursors 3a and 3b with moderate to very good yields at each reaction. The main limitation observed in this route was the bromination of both nonplanar polyaromatic compounds. However, in the case of compound 4a, an important amount of free corannulene can be recovered for further uses. The synthesis of 4b is the hardest step because we found polybromination if allowed to react for longer times than that reported above. Additionally, the purification is difficult too, since byproducts have similar Rf values. As a consequence, very long column chromatography must be carried out as well as large volumes of solvent have to be used to get a spectroscopically pure sample. This is not an actual drawback in the synthetic route presented in this work because compound 5b can be easily purified even if an impure batch of 4b is used. For that reason, the purity of 4b is not that important, but we suggest column chromatography purification anyways.
On the other hand, reactions leading to 5a, 5b and 6a have very good yields ranging from 78% to nearly quantitative. Sonogashira C-C coupling52,53 between 4a and ethynyltrimethylsilane occurred easily with no appreciable side reaction products. TMS deprotection to give 6a has to be performed carefully due to the inherent instability of this terminal alkyne. For this reason, the flask must be kept away from light over the course of the reaction, but it is not necessary during the work up. Nonetheless, we suggest the use of freshly prepared ethynyl corannulene as soon as possible or storage at -20 °C in the dark.
Final assembly relies on the well-known strategy of CuAAC (Copper(I)-catalyzed Azide-Alkyne Cycloaddition) "click" reaction54,55 in which a terminal alkyne and an azide are linked. This methodology is suitable for several reasons, the most important being its wide scope (admittance of a great variety of functional groups), the high yields obtained and the regiospecificity it presents (only the 1,4 adduct is obtained). The use of Cu(I) also works in this assembly, but we preferred the reduction of a Cu(II) salt (from CuSO4·5H2O, a very common chemical) in order to avoid copper(I) complex preparation, such as [Cu(NCMe)4]BF4, for instance.
In conclusion, a multi-step route towards nonpolyaromatic units assembly has been developed successfully by applying known reactions in traditional synthetic organic chemistry that are usually utilized for more common planar aromatic compounds. The weaker parts of this method (bromination of both starting molecules) are widely offset by the good performance observed for the other steps, especially the last reaction in which both pathways converge in the final molecule.
The authors have nothing to disclose.
This work was funded by the Spanish Ministerio de Economìa y Competitividad (CTQ 2013-41067-P). H.B. acknowledge with thanks a MEC-FPI grant.
2,15-Dimethylhexahelicene | N/A | N/A | Prepared according to reference 5b,c in the main text. |
Corannulene | N/A | N/A | Prepared according to reference 5a in the main text. |
N-Bromosuccinimide (NBS) | Sigma Aldrich | B8.125-5 | ReagentPlus®, 99%. Recrystallized from hot water. |
Benzoyl peroxide (BPO) | Sigma Aldrich | B-2030 | ~70% (titration). 30% water as stabilizer. |
Sodium azide | Sigma Aldrich | S2002 | ReagentPlus®, ≥99.5%. |
Gold (III) chloride Hydrate | Sigma Aldrich | 50778 | puriss. p.a., ACS reagent, ≥49% Au basis. |
Ethynyltrimethylsilane | Sigma Aldrich | 218170 | 98%. |
[PdCl2(dppf)] | N/A | N/A | Prepared according to reference 6 in the main text. |
CuI | N/A | N/A | Prepared according to reference 7 in the main text. |
KF | Sigma Aldrich | 307599 | 99%, spray-dried. |
(+)-Sodium L-ascorbate | Fluka | 11140 | BioXtra, ≥99.0% (NT). |
Copper(II) Sulphate 5-hydrate | Panreac | 131270 | for analysis. |
Carbon tetrachloride (CCl4) | Fluka | 87030 | for IR spectroscopy, ≥99.9%. |
Dichloromethane (DCM) | Fisher Scientific | D/1852/25 | Analytical reagent grade. Distilled prior to use. |
Hexane | Fisher Scientific | H/0355/25 | Analytical reagent grade. Distilled prior to use. |
Ethyl acetate | Scharlau | AC0145025S | Reagent grade. Distilled prior to use. |
Tetrahydrofuran (THF) | Fisher Scientific | T/0701/25 | Analytical reagent grade. Distilled prior to use. |
1,2-Dichloroethane (DCE) | Sigma Aldrich | D6,156-3 | ReagentPlus®, 99%. |
Methanol (MeOH) | VWR | 20847.36 | AnalaR NORMAPUR. |
Triethyl amine (NEt3) | Sigma Aldrich | T0886 | ≥99%. |
Silica gel | Acros | 360050010 | Particle size 40-60mm. |
Sand – low iron | Fisher Scientific | S/0360/63 | General purpose grade. |
TLC Silica gel 60 F254 | Merck | 1.05554.0001 | |
Monowave 300 (Microwave reactor) | Anton Para | ||
Sonicator | Grupo Selecta | 3000513 | 6 Litres. |